RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ANKMY2Q8IV38 441 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 PARP9Q8IXQ6 854 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 APPL2Q8NEU8 664 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 RBM15Q96T37 977 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TSC22D3Q99576 134 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TRIM54Q9BYV2 358 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 ZNF70Q9UC06 446 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 ZBBXA8MT70 800 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 DFFAO00273 331 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 RAD51Q06609 339 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM132DQ14C87 1099 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TTC23LQ6PF05 361 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 MXRA8Q9BRK3 442 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 EPN3Q9H201 632 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 PCDHB2Q9Y5E7 798 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 RNF103-CHMP3A0A140T963 221 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 MAGEB2O15479 319 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 PGBD4Q96DM1 585 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 MED15Q96RN5 788 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 CHRNA5P30532 468 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 SERPINB4P48594 390 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 XRRA1Q6P2D8 792 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 PPHLN1Q8NEY8 458 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TRIM51Q9BSJ1 452 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM8AQ9HCN3 771 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 FARP1Q9Y4F1 1045 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 ATP9BO43861 1147 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 GYPCP04921 128 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 ARHGEF26Q96DR7 871 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 UBA6A0AVT1 1052 aaPredicted RBP17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 NEMP1O14524 444 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 DPYSL4O14531 572 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 IL18RAPO95256 599 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 VEPH1Q14D04 833 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM117Q9H0C3 514 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 SNX9Q9Y5X1 595 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TRAPPC3O43617 180 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TBCCQ15814 346 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM259Q4ZIN3 620 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 MTBPQ96DY7 904 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 MOV10L1Q9BXT6 1211 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 C3orf70A6NLC5 250 aaPredicted RBP17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TCP11X1B4DZS4 312 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 SMAPO00193 183 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 SLC9A1P19634 815 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 ZNF677Q86XU0 584 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 DDX50Q9BQ39 737 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 SNX5Q9Y5X3 404 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 IQCA1LA6NCM1 817 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TAS2R42Q7RTR8 314 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 PRMT1Q99873 361 aaKnown RBP17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 TJP2Q9UDY2 1190 aa17.4■□□□□ 0.38
PCDHA1-203ENST00000504120 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SERPINB9P50453 376 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 TRADDQ15628 312 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 AGBL2Q5U5Z8 902 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 ERGIC2Q96RQ1 377 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 ASPSCR1Q9BZE9 553 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SESN2P58004 480 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 RNF135Q8IUD6 432 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SGSM3Q96HU1 749 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 MCEEQ96PE7 176 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 NEU2Q9Y3R4 380 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 MYO1DO94832 1006 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 LBRQ14739 615 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 ICE2Q659A1 982 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SPATA2LQ8IUW3 424 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 KIRREL3Q8IZU9 778 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 RMDN1Q96DB5 314 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SH2D3AQ9BRG2 576 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 RBM12Q9NTZ6 932 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 PSMC3IPQ9P2W1 217 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 CNOT7Q9UIV1 285 aaKnown RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 SYCE1LA8MT33 242 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 PRKCEQ02156 737 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 ZC2HC1CQ53FD0 456 aaPredicted RBP17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 ELP3Q9H9T3 547 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 CYP4F11Q9HBI6 524 aa17.39■□□□□ 0.37
PCDHA1-203ENST00000504120 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 PPP1R3GB7ZBB8 358 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 GH1P01241 217 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 UGP2Q16851 508 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 KLHDC7AQ5VTJ3 777 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 LINC00116Q8NCU8 138 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 KRT35Q92764 455 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 TRIM10Q9UDY6 481 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 ZC3H7BQ9UGR2 993 aaKnown RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 DDIASQ8IXT1 998 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 ICA1LQ8NDH6 482 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 TEX12Q9BXU0 123 aa17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 WARS2Q9UGM6 360 aaKnown RBP17.38■□□□□ 0.37
PCDHA1-203ENST00000504120 MOSPD1Q9UJG1 213 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms