RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 GDF9O60383 454 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 B3GAT3O94766 335 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 LYPLA2O95372 231 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
DDR1-250ENST00000503628 RARRES1P49788 294 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 CCR3P51677 355 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 SIM2Q14190 667 aaPredicted RBP17.39■□□□□ 0.37
DDR1-250ENST00000503628 FAM78AQ5JUQ0 283 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 PRR23CQ6ZRP0 262 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 PIK3AP1Q6ZUJ8 805 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 SLFN12Q8IYM2 578 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 FAM3CQ92520 227 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 TCEAL4Q96EI5 215 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 PRIMPOLQ96LW4 560 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 CCDC43Q96MW1 224 aaKnown RBP17.39■□□□□ 0.37
DDR1-250ENST00000503628 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
DDR1-250ENST00000503628 FZD8Q9H461 694 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 PDZD7Q9H5P4 517 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 GPRC5CQ9NQ84 441 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 BACE2Q9Y5Z0 518 aa17.39■□□□□ 0.37
DDR1-250ENST00000503628 ARHGEF37A1IGU5 675 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 HRO43593 1189 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 LRG1P02750 347 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 KCNA4P22459 653 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 TKTP29401 623 aaKnown RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 CXCL12P48061 93 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 SATB1Q01826 763 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 CSRP2Q16527 193 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 PRSS36Q5K4E3 855 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 MAP4K3Q8IVH8 894 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 IRF7Q92985 503 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 DDX27Q96GQ7 796 aaKnown RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 NAP1L4Q99733 375 aaKnown RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 IER2Q9BTL4 223 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 ZNF334Q9HCZ1 680 aaPredicted RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 CNOT1A5YKK6 2376 aaKnown RBP17.38■□□□□ 0.37
DDR1-250ENST00000503628 COL4A2P08572 1712 aa17.38■□□□□ 0.37
DDR1-250ENST00000503628 CHURC1-FNTBB4DL54 471 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 TMEM189-UBE2V1I3L0A0 370 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 I3L4J1 428 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 N4BP3O15049 544 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 USO1O60763 962 aaKnown RBP17.37■□□□□ 0.37
DDR1-250ENST00000503628 GDI1P31150 447 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 FNTBP49356 437 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 CLCNKBP51801 687 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 DMWDQ09019 674 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 SRSF5Q13243 272 aaKnown RBP17.37■□□□□ 0.37
DDR1-250ENST00000503628 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 TMEM132AQ24JP5 1023 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
DDR1-250ENST00000503628 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 ZNF461Q8TAF7 563 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 ASB16Q96NS5 453 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 FOXP1Q9H334 677 aaPredicted RBP17.37■□□□□ 0.37
DDR1-250ENST00000503628 RALYQ9UKM9 306 aaKnown RBP17.37■□□□□ 0.37
DDR1-250ENST00000503628 PCDHA12Q9UN75 941 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 PIAS3Q9Y6X2 628 aa17.37■□□□□ 0.37
DDR1-250ENST00000503628 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 PRRG1O14668 218 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 CHRNB1P11230 501 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 ELF1P32519 619 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 CCR2P41597 374 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 BRCC3P46736 316 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 ROR1Q01973 937 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
DDR1-250ENST00000503628 GAS6Q14393 721 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 GLRA4Q5JXX5 417 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 CDCA2Q69YH5 1023 aaPredicted RBP17.36■□□□□ 0.37
DDR1-250ENST00000503628 VITQ6UXI7 678 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 ZBTB8OSQ8IWT0 167 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 ZSWIM3Q96MP5 696 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 TRPV5Q9NQA5 729 aa17.36■□□□□ 0.37
DDR1-250ENST00000503628 WDR27A2RRH5 827 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 ZNF197O14709 1029 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 TRAPPC3O43617 180 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 ABLIM3O94929 683 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 PSMC3P17980 439 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 CCNE1P24864 410 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
DDR1-250ENST00000503628 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.35■□□□□ 0.37
DDR1-250ENST00000503628 C3orf58Q8NDZ4 430 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 PPP1R10Q96QC0 940 aaKnown RBP17.35■□□□□ 0.37
DDR1-250ENST00000503628 ADPGKQ9BRR6 497 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 GOLGA2P5Q9HBQ8 144 aa17.35■□□□□ 0.37
DDR1-250ENST00000503628 H3BQV1 296 aa17.34■□□□□ 0.37
DDR1-250ENST00000503628 MICAL2O94851 1124 aa17.34■□□□□ 0.37
DDR1-250ENST00000503628 SEC24AO95486 1093 aa17.34■□□□□ 0.37
DDR1-250ENST00000503628 EDN1P05305 212 aa17.34■□□□□ 0.37
DDR1-250ENST00000503628 LIG1P18858 919 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms