RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 HOXA6P31267 233 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NEK2P51955 445 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PPP2R2AP63151 447 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 XIAPP98170 497 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 VWA3BQ502W6 1294 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 WDR78Q5VTH9 848 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 OLFML2BQ68BL8 750 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 OTUD6AQ7L8S5 288 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 POLNQ7Z5Q5 900 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ST13P4Q8IZP2 240 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CRYBG2Q8N1P7 616 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FSD1Q9BTV5 496 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM55Q9BYV6 548 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FOXP3Q9BZS1 431 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 RNF41Q9H4P4 317 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KIF9Q9HAQ2 790 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FGFR1OP2Q9NVK5 253 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MTMR10Q9NXD2 777 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA7Q9P0W8 599 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SUN2Q9UH99 717 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PLXNB3Q9ULL4 1909 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CPAMD8Q8IZJ3 1885 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM131Q92545 1883 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PTPDC1A2A3K4 754 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PDXKO00764 312 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 IRS4O14654 1257 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GPAA1O43292 621 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KRT38O76015 456 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PAPSS2O95340 614 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DEXIO95424 95 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DHRS4L1P0CG22 281 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 IDEP14735 1019 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ALDH1B1P30837 517 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PLCD1P51178 756 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CCNHP51946 323 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 GRB14Q14449 540 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MAPK6Q16659 721 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF423Q2M1K9 1284 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM63BQ5T3F8 832 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LMOD2Q6P5Q4 547 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ABHD15Q6UXT9 468 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 RIOX2Q8IUF8 465 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA4Q8NEY3 305 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ATL2Q8NHH9 583 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC110Q8TBZ0 833 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF398Q8TD17 642 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZBTB9Q96C00 473 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PBKQ96KB5 322 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CGREF1Q99674 301 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TUFT1Q9NNX1 390 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 USP40Q9NVE5 1235 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DSEQ9UL01 958 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZNRF3Q9ULT6 936 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZMYND8Q9ULU4 1186 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TRIP12Q14669 1992 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ADAMTS20P59510 1910 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 IGLV3-10A0A075B6K4 115 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ASB14A6NK59 587 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 STRNO43815 780 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 TOMM70O94826 608 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SYF2O95926 243 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC159P0C7I6 412 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ARPC4P59998 168 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 RPL26P61254 145 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 LRRC63Q05C16 580 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 HLTFQ14527 1009 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZACNQ401N2 412 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 C10orf76Q5T2E6 689 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MPRIPQ6WCQ1 1025 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 INTS8Q75QN2 995 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MCF2L2Q86YR7 1114 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DHX40Q8IX18 779 aaKnown RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 FAM186BQ8IYM0 893 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ERMNQ8TAM6 284 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PARD3BQ8TEW8 1205 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CCT6BQ92526 530 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NKD2Q969F2 451 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 HAUS1Q96CS2 278 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 HAPLN3Q96S86 360 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PNKPQ96T60 521 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC68Q9H2F9 335 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 MMADHCQ9H3L0 296 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-204ENST00000503468 Q9H521 79 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SYNCQ9H7C4 482 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PRDM9Q9NQV7 894 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF69Q9UC07 566 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 KCNH3Q9ULD8 1083 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ARL2BPQ9Y2Y0 163 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SH3GLB1Q9Y371 365 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHA1Q9Y5I3 950 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 PCDH15Q96QU1 1955 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 A0A0B4J269 797 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 SPECC1L-ADORA2AF8WAN1 911 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CDK2AP1O14519 115 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 DPM1O60762 260 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 ATP6V1G1O75348 118 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 NUDT17P0C025 328 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 CAP2P40123 477 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 RANBP1P43487 201 aa2.98□□□□□ -1.93
NEDD4-204ENST00000503468 APLP1P51693 650 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms