RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 LRGUKQ96M69 825 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 FAM193BQ96PV7 902 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 FBXO34Q9NWN3 711 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 NOB1Q9ULX3 412 aaKnown RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 TARBP1Q13395 1621 aaKnown RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 DIRC3C9JPN6 131 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 GRM6O15303 877 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 TSPAN6O43657 245 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 SCAF4O95104 1147 aaKnown RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 C1SP09871 688 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 MTHFD1P11586 935 aaKnown RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 MALP21145 153 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 LPOP22079 712 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 PTTG1IPP53801 180 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 FOXE3Q13461 319 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 ZXDCQ2QGD7 858 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 PABPC1LQ4VXU2 614 aaKnown RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 METRNLQ641Q3 311 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 DBX2Q6ZNG2 339 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 EPM2AIP1Q7L775 607 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 GRAMD1CQ8IYS0 662 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 NLGN4YQ8NFZ3 816 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 ZNF503Q96F45 646 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 GSTO2Q9H4Y5 243 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 KMT5AQ9NQR1 393 aa7.43□□□□□ -1.22
NIPBL-203ENST00000503274 TDRD9Q8NDG6 1382 aaKnown RBP7.43□□□□□ -1.22
NIPBL-203ENST00000503274 LRRC14BA6NHZ5 514 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 FAM20BO75063 409 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 ARIH2O95376 493 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 FTLP02792 175 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-203ENST00000503274 CD1AP06126 327 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 SNAPC2Q13487 334 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 ZNF267Q14586 743 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-203ENST00000503274 FAM102AQ5T9C2 384 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-203ENST00000503274 NXNQ6DKJ4 435 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 CYB5RLQ6IPT4 315 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 TCEAL8Q8IYN2 117 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 IL17RDQ8NFM7 739 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 CACTINQ8WUQ7 758 aaKnown RBP7.42□□□□□ -1.22
NIPBL-203ENST00000503274 CLIP3Q96DZ5 547 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 C1GALT1C1Q96EU7 318 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 TRPM5Q9NZQ8 1165 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 RAD54L2Q9Y4B4 1467 aa7.42□□□□□ -1.22
NIPBL-203ENST00000503274 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 RIMBP3CA6NJZ7 1639 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 RIMBP3BA6NNM3 1639 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 RIMBP3Q9UFD9 1639 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 AHRRA9YTQ3 701 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 PRPF3O43395 683 aaKnown RBP7.41□□□□□ -1.22
NIPBL-203ENST00000503274 ITGB1P05556 798 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 SBK3P0C264 359 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 SLC6A2P23975 617 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 MAP2K6P52564 334 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 HK3P52790 923 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 RNASE9P60153 205 aaKnown RBP7.41□□□□□ -1.22
NIPBL-203ENST00000503274 SLC25A3Q00325 362 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 NOGQ13253 232 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 MIIPQ5JXC2 388 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 GDF7Q7Z4P5 450 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 FITM2Q8N6M3 262 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 SLC35G2Q8TBE7 412 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 DIS3LQ8TF46 1054 aaKnown RBP7.41□□□□□ -1.22
NIPBL-203ENST00000503274 REXO4Q9GZR2 422 aaKnown RBP7.41□□□□□ -1.22
NIPBL-203ENST00000503274 ANLNQ9NQW6 1124 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 PCDHA3Q9Y5H8 950 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 FGD5Q6ZNL6 1462 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 ARHGEF11O15085 1522 aa7.41□□□□□ -1.22
NIPBL-203ENST00000503274 ZNF185O15231 689 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 MATN3O15232 486 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 DGCR2P98153 550 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 PUM1Q14671 1186 aaKnown RBP eCLIP7.4□□□□□ -1.22
NIPBL-203ENST00000503274 AGAP9Q5VTM2 703 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 SLC4A10Q6U841 1118 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 GGNQ86UU5 652 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 RHOT2Q8IXI1 618 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 ZNF276Q8N554 614 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 TSR2Q969E8 191 aaKnown RBP7.4□□□□□ -1.22
NIPBL-203ENST00000503274 NEU1Q99519 415 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 CHST2Q9Y4C5 530 aa7.4□□□□□ -1.22
NIPBL-203ENST00000503274 USP15Q9Y4E8 981 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-203ENST00000503274 CUX1P39880 1505 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 GRIN2BQ13224 1484 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 MAGI1Q96QZ7 1491 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-203ENST00000503274 NT5C1B-RDH14C9J2C7 533 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 F2RL2O00254 374 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 HAUS5O94927 633 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 PEX11BO96011 259 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 ALDH2P05091 517 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 SPATA31D3P0C874 917 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 SLC6A4P31645 630 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 MLC1Q15049 377 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 MINDY4Q4G0A6 757 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 FLYWCH1Q4VC44 716 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 CCDC157Q569K6 752 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 TSHZ3Q63HK5 1081 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 SPATA31D4Q6ZUB0 917 aa7.39□□□□□ -1.23
NIPBL-203ENST00000503274 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms