RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SPDYAQ5MJ70 313 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NAA35Q5VZE5 725 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 BTBD8Q5XKL5 378 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 FAM180BQ6P0A1 224 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 Q6ZNX1 250 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 BEND4Q6ZU67 534 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PATL1Q86TB9 770 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ITIH5Q86UX2 942 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 C12orf56Q8IXR9 622 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SYTL1Q8IYJ3 562 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TBC1D21Q8IYX1 336 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ST13P4Q8IZP2 240 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 HCAR2Q8TDS4 363 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF473Q8WTR7 871 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NOC3LQ8WTT2 800 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NLRP7Q8WX94 980 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SLC9A6Q92581 669 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NCLNQ969V3 563 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF594Q96JF6 807 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 CNDP2Q96KP4 475 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 IFT74Q96LB3 600 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TTC25Q96NG3 672 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SPATA16Q9BXB7 569 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 IFIH1Q9BYX4 1025 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 CRNKL1Q9BZJ0 848 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 FTOQ9C0B1 505 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SRCIN1Q9C0H9 1055 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 WNT5BQ9H1J7 359 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TBC1D22BQ9NU19 505 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 REV1Q9UBZ9 1251 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PRKAG2Q9UGJ0 569 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SLC7A8Q9UHI5 535 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SOX13Q9UN79 622 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 AGTPBP1Q9UPW5 1226 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 CEMIPQ8WUJ3 1361 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 HEG1Q9ULI3 1381 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 PVALEFA0A1B0GWK0 134 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 A8MVJ9 347 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 E9PBE3 544 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 GOLGA8SH3BPF8 625 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 K7ENM7 598 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MAPK13O15264 365 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 GTPBP6O43824 516 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CNOT3O75175 753 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SLITRK3O94933 977 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FAM107AO95990 144 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ENO2P09104 434 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 UBTFL6P0CB48 400 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SLC5A1P13866 664 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 GSTO1P78417 241 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 TAGLNQ01995 201 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 LAMC2Q13753 1193 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SSPNQ14714 243 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CYTH1Q15438 398 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SLC14A2Q15849 920 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 GSTA3Q16772 222 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 VWA3BQ502W6 1294 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 HABP4Q5JVS0 413 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CLVS2Q5SYC1 327 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CCNJQ5T5M9 372 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 SHEQ5VZ18 495 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 IQSEC1Q6DN90 963 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CEP85Q6P2H3 762 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 C4orf22Q6V702 233 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MFSD6Q6ZSS7 791 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FASTKD5Q7L8L6 764 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ZER1Q7Z7L7 766 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CHD1LQ86WJ1 897 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CPXCR1Q8N123 301 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 BBS5Q8N3I7 341 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ENAHQ8N8S7 591 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FAM133AQ8N9E0 248 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 CCDC63Q8NA47 563 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 OR10Z1Q8NGY1 313 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 MGARPQ8TDB4 240 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 FBF1Q8TES7 1133 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 PTCD2Q8WV60 388 aaKnown RBP6.9□□□□□ -1.3
CLCN3-203ENST00000502998 ANKS1AQ92625 1134 aa6.9□□□□□ -1.3
CLCN3-203ENST00000502998 BRF1Q92994 677 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms