RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ZNF527Q8NB42 609 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 FNIP1Q8TF40 1166 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 YTHDC1Q96MU7 727 aaKnown RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 TTLL2Q9BWV7 592 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 DPH1Q9BZG8 443 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLC6A15Q9H2J7 730 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 SERHLQ9NQF3 203 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 ANAPC4Q9UJX5 808 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 MED16Q9Y2X0 877 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 PCDHGB3Q9Y5G1 929 aa6.38□□□□□ -1.39
HMGB1P3-201ENST00000502802 ATRNL1Q5VV63 1379 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 HMGB1P1B2RPK0 211 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 FFAR2O15552 330 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 TBC1D4O60343 1298 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 MATN4O95460 622 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 RAP2AP10114 183 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 MTHFD1P11586 935 aaKnown RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ALOX15P16050 662 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 JUNBP17275 347 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 CSF2RBP32927 897 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 CASRP41180 1078 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ALDH1A3P47895 512 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ADCY7P51828 1080 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ATP2C1P98194 919 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 EXOSC9Q06265 439 aaKnown RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 USP10Q14694 798 aaKnown RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 MPEG1Q2M385 716 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLC35G1Q2M3R5 365 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 GAGE13Q4V321 117 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ALFQ53S48 1182 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 FAM47AQ5JRC9 791 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ARTNQ5T4W7 220 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 AFMIDQ63HM1 303 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZNF783Q6ZMS7 281 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 GIMAP8Q8ND71 665 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 IL17RDQ8NFM7 739 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 OR5M3Q8NGP4 307 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 TRIM63Q969Q1 353 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZNF566Q969W8 418 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 TMEM168Q9H0V1 697 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 MYLK2Q9H1R3 596 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 ADAM7Q9H2U9 754 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLAMF7Q9NQ25 335 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 MYO1AQ9UBC5 1043 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 PNMA2Q9UL42 364 aa6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P3-201ENST00000502802 CARMIL2Q6F5E8 1435 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZMYM3Q14202 1370 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SCO2A0A1W2PP80 73 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 TRIM43BA6NCK2 446 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 BTN3A1O00481 513 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 GRM6O15303 877 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 PLA2G6O60733 806 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 GNAI3P08754 354 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZNF888P0CJ79 500 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 CD53P19397 219 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 FGFR2P21802 821 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 EEF1GP26641 437 aaKnown RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 RPS16P62249 146 aaKnown RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 GNAI1P63096 354 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 DLG4P78352 724 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 HTRA4P83105 476 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 APBA1Q02410 837 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 PTH1RQ03431 593 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLC13A2Q13183 592 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 HABP2Q14520 560 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 CCDC93Q567U6 631 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZFYVE27Q5T4F4 411 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 OTUD7BQ6GQQ9 843 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 CMTM4Q8IZR5 234 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 TXLNBQ8N3L3 684 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 ANKRD53Q8N9V6 530 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 MAML1Q92585 1016 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 TRIM43Q96BQ3 446 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SPATA25Q9BR10 227 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 ISCA1Q9BUE6 129 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SMURF2Q9HAU4 748 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 BARX1Q9HBU1 254 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SRRDQ9UH36 339 aa6.36□□□□□ -1.39
HMGB1P3-201ENST00000502802 SASH1O94885 1247 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ABHD16AO95870 558 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 CSTBP04080 98 aaKnown RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 CYP1A1P04798 512 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ANXA2P07355 339 aaKnown RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SBK3P0C264 359 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 NOMO3P69849 1222 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 DLX2Q07687 328 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 KIF22Q14807 665 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ACAP1Q15027 740 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 MLANAQ16655 118 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 BEND5Q7L4P6 421 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 FBXO15Q8NCQ5 510 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 KCNN1Q92952 543 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms