RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 RAPH1Q70E73 1250 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TRPC4APQ8TEL6 797 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZNF624Q9P2J8 865 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TBC1D14Q9P2M4 693 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 DNM3Q9UQ16 869 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MROH7Q68CQ1 1323 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ETV5P41161 510 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 S100A12P80511 92 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZNF425Q6IV72 752 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 C19orf44Q9H6X5 657 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MKS1Q9NXB0 559 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PDPK1O15530 556 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 H2AFZP0C0S5 128 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PIK3R1P27986 724 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 EMC2Q15006 297 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SPDYAQ5MJ70 313 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 WDR93Q6P2C0 686 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 H2AFVQ71UI9 128 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZNF280BQ86YH2 543 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CCDC60Q8IWA6 550 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 OSBP2Q969R2 916 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CDH19Q9H159 772 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ADGRG1Q9Y653 693 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SLC15A2Q16348 729 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ARL13BQ3SXY8 428 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 LIN52Q52LA3 116 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TATDN2Q93075 761 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 OSBPL8Q9BZF1 889 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ATXN2Q99700 1313 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PLCG2P16885 1265 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 EHD3Q9NZN3 535 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SMG5Q9UPR3 1016 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CCDC188H7C350 402 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SLC16A2P36021 539 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ARMCX5Q6P1M9 558 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 LRRC34Q8IZ02 419 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 BTBD6Q96KE9 485 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CYP4F11Q9HBI6 524 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZBTB43O43298 467 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ALBP02768 609 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SAGE2PA6NJ88 616 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SMCO1Q147U7 214 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TRIQKQ629K1 86 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 LRRC6Q86X45 466 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ENTPD7Q9NQZ7 604 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SEMA3AQ14563 771 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 FBXL13Q8NEE6 735 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MSANTD3Q96H12 275 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PSKH2Q96QS6 385 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZNF287Q9HBT7 754 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TOR4AQ9NXH8 423 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.01□□□□□ -1.613e-38■■□□□ 14.2
NEAT1-202ENST00000501122 ITIH1P19827 911 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 COL19A1Q14993 1142 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CHST3Q7LGC8 479 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TMIEQ8NEW7 156 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 NCOA7Q8NI08 942 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 RETREG1Q9H6L5 497 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 NHEJ1Q9H9Q4 299 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 LRRC17Q8N6Y2 441 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MAP2K7O14733 419 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZSCAN9O15535 394 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CHRNA3P32297 505 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 EIF4A3P38919 411 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CENPAP49450 140 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 OXCT1P55809 520 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CAV1Q03135 178 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TRIP4Q15650 581 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MZT2BQ6NZ67 158 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TNIP3Q96KP6 325 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 INTS2Q9H0H0 1204 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CCDC144AA2RUR9 1427 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 IL6P05231 212 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 SARSP49591 514 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 RMND5BQ96G75 393 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ARPP19P56211 112 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TEX47Q8TBZ9 253 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PDCD6IPQ8WUM4 868 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ATL1Q8WXF7 558 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 HNRNPABQ99729 332 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ROPN1BQ9BZX4 212 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ROPN1Q9HAT0 212 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ARMCX3Q9UH62 379 aaPredicted RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TMEM98Q9Y2Y6 226 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 MAPK4P31152 587 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 KCNJ2P63252 427 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CCDC137Q6PK04 289 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CABP7Q86V35 215 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 CCSER1Q9C0I3 900 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ERVK-11Q9UQG0 969 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PTPDC1A2A3K4 754 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TRIM49BA6NDI0 452 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 TRIM49D1C9J1S8 452 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 DNM1LO00429 736 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 ZW10O43264 779 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 STAT1P42224 750 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PTPN12Q05209 780 aaKnown RBP5.01□□□□□ -1.61
NEAT1-202ENST00000501122 PDK3Q15120 406 aa5.01□□□□□ -1.61
NEAT1-202ENST00000501122 FAM76BQ5HYJ3 339 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms