RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 B3GALT6Q96L58 329 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 TLE6Q9H808 572 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 PRDM6Q9NQX0 595 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 MAN1B1Q9UKM7 699 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
PRKCB-210ENST00000498739 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-210ENST00000498739 TRANK1O15050 2925 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 C2orf71A6NGG8 1288 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 PER2O15055 1255 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 EXOC3O60645 756 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 EFEMP2O95967 443 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 LRPAP1P30533 357 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■■■■ 36.4
PRKCB-210ENST00000498739 BRCC3P46736 316 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 GLUD2P49448 558 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 PTPN14Q15678 1187 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 SNRNP35Q16560 246 aaKnown RBP18.17■□□□□ 0.5
PRKCB-210ENST00000498739 USP41Q3LFD5 358 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 EFCAB13Q8IY85 973 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 FBXL18Q96ME1 805 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
PRKCB-210ENST00000498739 PDE11AQ9HCR9 933 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 MRPL17Q9NRX2 175 aaKnown RBP18.17■□□□□ 0.5
PRKCB-210ENST00000498739 NUB1Q9Y5A7 615 aa18.17■□□□□ 0.5
PRKCB-210ENST00000498739 PDCD11Q14690 1871 aaKnown RBP18.17■□□□□ 0.5
PRKCB-210ENST00000498739 BIN1O00499 593 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 NR3C1P04150 777 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 PRCPP42785 496 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 TFAMQ00059 246 aaKnown RBP18.16■□□□□ 0.5
PRKCB-210ENST00000498739 ELAVL2Q12926 359 aaKnown RBP18.16■□□□□ 0.5
PRKCB-210ENST00000498739 FAM171A1Q5VUB5 890 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 CD300LGQ6UXG3 332 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 EP400NLQ6ZTU2 488 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 NT5DC4Q86YG4 428 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 TRAF3IP3Q9Y228 551 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 SSX2IPQ9Y2D8 614 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 TRIP11Q15643 1979 aa18.16■□□□□ 0.5
PRKCB-210ENST00000498739 I3L4J1 428 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 MCM4P33991 863 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 DSG1Q02413 1049 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 SURF1Q15526 300 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 DUSP6Q16828 381 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 COBLL1Q53SF7 1204 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 LMBRD2Q68DH5 695 aaPredicted RBP18.15■□□□□ 0.5
PRKCB-210ENST00000498739 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 RIN2Q8WYP3 895 aaPredicted RBP18.15■□□□□ 0.5
PRKCB-210ENST00000498739 CDCA3Q99618 268 aaPredicted RBP18.15■□□□□ 0.5
PRKCB-210ENST00000498739 CLSTN2Q9H4D0 955 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 CHST7Q9NS84 486 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 DPP3Q9NY33 737 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
PRKCB-210ENST00000498739 PRRC2BQ5JSZ5 2229 aaKnown RBP18.15■□□□□ 0.5
PRKCB-210ENST00000498739 MYO9BQ13459 2157 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 PPEF2O14830 753 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 LINC01565O15544 149 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 NCK2O43639 380 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 TMEM191BP0C7N4 346 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 NR2F2P24468 414 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 CYP24A1Q07973 514 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 STIM1Q13586 685 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 RTP2Q5QGT7 225 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 KIAA0319Q5VV43 1072 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 C9orf57Q5W0N0 161 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 EFHBQ8N7U6 833 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
PRKCB-210ENST00000498739 HLA-CQ95604 372 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 PABPC5Q96DU9 382 aaKnown RBP18.14■□□□□ 0.49
PRKCB-210ENST00000498739 TTPALQ9BTX7 342 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 EMILIN2Q9BXX0 1053 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 NUP62CLQ9H1M0 184 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 DMAC2Q9NW81 257 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 KIAA1468Q9P260 1216 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 ANK1P16157 1881 aa18.14■□□□□ 0.49
PRKCB-210ENST00000498739 LILRB3O75022 631 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 DLATP10515 647 aaKnown RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 TKTP29401 623 aaKnown RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 CASP4P49662 377 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 MORC3Q14149 939 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 MYBPC2Q14324 1141 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 PSMD6Q15008 389 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 ZCWPW2Q504Y3 356 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 LLGL2Q6P1M3 1020 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 PRSS55Q6UWB4 352 aaPredicted RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 ADSSL1Q8N142 457 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 TMEM174Q8WUU8 243 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 CCDC127Q96BQ5 260 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 ANKRD36BP1Q96IX9 119 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 KLHL5Q96PQ7 755 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 FNBP1Q96RU3 617 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 MTMR12Q9C0I1 747 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 UBE2ZQ9H832 354 aaPredicted RBP18.13■□□□□ 0.49
PRKCB-210ENST00000498739 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms