RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 MEFVO15553 781 aaPredicted RBP18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 CBFA2T2O43439 604 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 SERPINC1P01008 464 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 TRIM49P0CI25 452 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 TRIM49CP0CI26 452 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 ATICP31939 592 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 PPM1AP35813 382 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 FMO5P49326 533 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 MYO1EQ12965 1108 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 TRPC3Q13507 836 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 KRT31Q15323 416 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 SMYD5Q6GMV2 418 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 TRAPPC11Q7Z392 1133 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 LRRC52Q8N7C0 313 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 PLEKHO2Q8TD55 490 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 FAXDC2Q96IV6 333 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 COLEC11Q9BWP8 271 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 MTMR12Q9C0I1 747 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 HSD3B7Q9H2F3 369 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 PRO3102Q9H379 93 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 NDST4Q9H3R1 872 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 MSRAQ9UJ68 235 aa18.96■□□□□ 0.63
CTDSP1-215ENST00000498160 TRIP11Q15643 1979 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 TMEM189-UBE2V1I3L0A0 370 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 STAU1O95793 577 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 C4BPAP04003 597 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 ALDH2P05091 517 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 ALDH7A1P49419 539 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 DLG4P78352 724 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 MYL7Q01449 175 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 NAB2Q15742 525 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 PAN2Q504Q3 1202 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 SPOUT1Q5T280 376 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 PRPF38BQ5VTL8 546 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 FAM117BQ6P1L5 589 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 DCLRE1AQ6PJP8 1040 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 CHRDL2Q6WN34 429 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 C15orf39Q6ZRI6 1047 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 SV2AQ7L0J3 742 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 COLGALT2Q8IYK4 626 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 RNF214Q8ND24 703 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 FBXL13Q8NEE6 735 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 ZNF558Q96NG5 402 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 MIOSQ9NXC5 875 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 COQ4Q9Y3A0 265 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 DAAM1Q9Y4D1 1078 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 PCDHB12Q9Y5F1 795 aa18.95■□□□□ 0.62
CTDSP1-215ENST00000498160 ANO9A1A5B4 782 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 PES1O00541 588 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■■■ 37.4
CTDSP1-215ENST00000498160 GCLMP48507 274 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 COPB1P53618 953 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 WNT7BP56706 349 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 SMAD3P84022 425 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 ELAVL2Q12926 359 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 SGSM1Q2NKQ1 1148 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 SV2CQ496J9 727 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 C1orf220Q5T0J3 134 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 C1orf127Q8N9H9 656 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 CLP1Q92989 425 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 FAM81BQ96LP2 452 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 POP1Q99575 1024 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 PLVAPQ9BX97 442 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 NRDE2Q9H7Z3 1164 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 PLAGL2Q9UPG8 496 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 FAN1Q9Y2M0 1017 aa18.94■□□□□ 0.62
CTDSP1-215ENST00000498160 LGALS16A8MUM7 142 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 PODXLO00592 558 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 TRAPPC3O43617 180 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 ITGB3P05106 788 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 P4HA1P13674 534 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 PIK3CAP42336 1068 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 GATMP50440 423 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 PPP3CAQ08209 521 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 NCOA4Q13772 614 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 UPP1Q16831 310 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 C9orf57Q5W0N0 161 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 GBP6Q6ZN66 633 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 OR5B17Q8NGF7 314 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 FAM124BQ9H5Z6 455 aaPredicted RBP18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 CWH43Q9H720 699 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 VRTNQ9H8Y1 702 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 TAB2Q9NYJ8 693 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 CEP290O15078 2479 aa18.93■□□□□ 0.62
CTDSP1-215ENST00000498160 PIRO00625 290 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 DDHD2O94830 711 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 RB1P06400 928 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 KRT19P08727 400 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 ATP1A3P13637 1013 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 TAF6P49848 677 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 AFF1P51825 1210 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 FANCCQ00597 558 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 MIIPQ5JXC2 388 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 LMBRD2Q68DH5 695 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 SARM1Q6SZW1 724 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms