RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 AGAP9Q5VTM2 703 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 USP45Q70EL2 814 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 RHOT2Q8IXI1 618 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 SYNE4Q8N205 404 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 FITM2Q8N6M3 262 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 DCBLD1Q8N8Z6 715 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 RB1CC1Q8TDY2 1594 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF483Q8TF39 744 aaPredicted RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 HAS1Q92839 578 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 LENG9Q96B70 501 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 RHOBTB2Q9BYZ6 727 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 GSTO2Q9H4Y5 243 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF768Q9H5H4 540 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 NRDE2Q9H7Z3 1164 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 SLC2A4RGQ9NR83 387 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 FBXO34Q9NWN3 711 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF180Q9UJW8 692 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 PNMA8BQ9ULN7 279 aaPredicted RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 FZD1Q9UP38 647 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 POLHQ9Y253 713 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ATP11BQ9Y2G3 1177 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 USP15Q9Y4E8 981 aaPredicted RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 GRM6O15303 877 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 SLC16A6O15403 523 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 NARSO43776 548 aaKnown RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 ARIH2O95376 493 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 ITGB1P05556 798 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 HLA-DOAP06340 250 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 LAG3P18627 525 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 MAKP20794 623 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 NR4A1P22736 598 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 GCSHP23434 173 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 SLC6A2P23975 617 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 MCM7P33993 719 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 TGFB2P61812 414 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 FAM189BP81408 668 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 ABHD18Q0P651 414 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 KHDC1Q4VXA5 237 aaKnown RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 TIGD2Q4W5G0 525 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 TSHZ3Q63HK5 1081 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 CATIPQ7Z7H3 387 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 C3orf20Q8ND61 904 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 IL17RDQ8NFM7 739 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 JPH3Q8WXH2 748 aaPredicted RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 NEU1Q99519 415 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 VRK1Q99986 396 aaPredicted RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 GTPBP4Q9BZE4 634 aaKnown RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 CDH19Q9H159 772 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 MMRN2Q9H8L6 949 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 AKIP1Q9NQ31 210 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 GPRC5BQ9NZH0 403 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 THRAP3Q9Y2W1 955 aaKnown RBP3.73□□□□□ -1.81
RIF1-212ENST00000498041 FPGT-TNNI3KV9GXZ4 949 aa3.73□□□□□ -1.81
RIF1-212ENST00000498041 RFPL1O75677 317 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 NCR1O76036 304 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 HAUS5O94927 633 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 CD1AP06126 327 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 CKBP12277 381 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 MALP21145 153 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 SMARCA1P28370 1054 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 CYP2C19P33261 490 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 MXRA7P84157 204 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 SNAPC2Q13487 334 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 PGS1Q32NB8 556 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 IGFL4Q6B9Z1 124 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 RHOUQ7L0Q8 258 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 FAM9AQ8IZU1 332 aaPredicted RBP3.72□□□□□ -1.81
RIF1-212ENST00000498041 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 NUP133Q8WUM0 1156 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 HPS3Q969F9 1004 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 RGMAQ96B86 450 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 CLIP3Q96DZ5 547 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 MVB12AQ96EY5 273 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 MYEOVQ96EZ4 313 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 MAP3K14Q99558 947 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 PACSIN1Q9BY11 444 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 TEX101Q9BY14 249 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 RTFDC1Q9BY42 306 aaPredicted RBP3.72□□□□□ -1.81
RIF1-212ENST00000498041 RNPEPQ9H4A4 650 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 KMT5AQ9NQR1 393 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 KLHL11Q9NVR0 708 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 ZIM2Q9NZV7 527 aa3.72□□□□□ -1.81
RIF1-212ENST00000498041 A0A1B0GTW7 788 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 CDHR4A6H8M9 788 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 TMEM200CA6NKL6 621 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 PPM1GO15355 546 aaPredicted RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 SLC43A1O75387 559 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 OFD1O75665 1012 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 PRSS23O95084 383 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 NDUFA10O95299 355 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 ABHD16AO95870 558 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 FTLP02792 175 aaPredicted RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 CFIP05156 583 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 ADH4P08319 380 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 SBK3P0C264 359 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 FTH1P19P0C7X4 201 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 ZFP36P26651 326 aaKnown RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 SLC6A4P31645 630 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 BMPR1AP36894 532 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms