RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 MED15Q96RN5 788 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 RC3H2Q9HBD1 1191 aaKnown RBP21.71■■□□□ 1.07
CTSD-206ENST00000497544 SLC38A7Q9NVC3 462 aa21.71■■□□□ 1.07
CTSD-206ENST00000497544 XPOTO43592 962 aaKnown RBP21.7■■□□□ 1.06
CTSD-206ENST00000497544 GNA14O95837 355 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 ALADP13716 330 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 PSMD6Q15008 389 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 CCDC40Q4G0X9 1142 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 JADE1Q6IE81 842 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 LRRC55Q6ZSA7 311 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 USP37Q86T82 979 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 NT5DC4Q86YG4 428 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 CACTINQ8WUQ7 758 aaKnown RBP21.7■■□□□ 1.06
CTSD-206ENST00000497544 CCDC127Q96BQ5 260 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 ZMAT2Q96NC0 199 aaKnown RBP21.7■■□□□ 1.06
CTSD-206ENST00000497544 DERAQ9Y315 318 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 ANK1P16157 1881 aa21.7■■□□□ 1.06
CTSD-206ENST00000497544 SLC16A3O15427 465 aaKnown RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 CA3P07451 260 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 DLATP10515 647 aaKnown RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 TNNI1P19237 187 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 ZNF165P49910 485 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 TMEM132DQ14C87 1099 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 INTS8Q75QN2 995 aaKnown RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 CREBRFQ8IUR6 639 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 SP7Q8TDD2 431 aaPredicted RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 TMC2Q8TDI7 906 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 NRDE2Q9H7Z3 1164 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 METTL14Q9HCE5 456 aaKnown RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 UBQLN1Q9UMX0 589 aaKnown RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
CTSD-206ENST00000497544 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.69■■□□□ 1.06
CTSD-206ENST00000497544 LCHNA4D1U4 455 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 DDHD2O94830 711 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 ALDH2P05091 517 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 VAMP7P51809 220 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 TFAMQ00059 246 aaKnown RBP21.68■■□□□ 1.06
CTSD-206ENST00000497544 LRSAM1Q6UWE0 723 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 ZNF280BQ86YH2 543 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 BEST2Q8NFU1 509 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 PARD3BQ8TEW8 1205 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 PPP1R10Q96QC0 940 aaKnown RBP21.68■■□□□ 1.06
CTSD-206ENST00000497544 C2CD2Q9Y426 696 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 MRPL42Q9Y6G3 142 aaKnown RBP21.68■■□□□ 1.06
CTSD-206ENST00000497544 RALGAPA2Q2PPJ7 1873 aa21.68■■□□□ 1.06
CTSD-206ENST00000497544 SMTNL1A8MU46 457 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 CAVIN2O95810 425 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 NFICP08651 508 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 SSTR3P32745 418 aaPredicted RBP21.67■■□□□ 1.06
CTSD-206ENST00000497544 WNT7BP56706 349 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 MYL5Q02045 173 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 TUSC3Q13454 348 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 ZBTB6Q15916 424 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 FRMD5Q7Z6J6 570 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 FAM114A1Q8IWE2 563 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 ANKRD36BP1Q96IX9 119 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 BPIFA3Q9BQP9 254 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 ANP32EQ9BTT0 268 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 TSPY26PQ9H489 355 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 THAP9Q9H5L6 903 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 CWH43Q9H720 699 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 AAASQ9NRG9 546 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 MAGEC2Q9UBF1 373 aaPredicted RBP21.67■■□□□ 1.06
CTSD-206ENST00000497544 ARMCX3Q9UH62 379 aaPredicted RBP21.67■■□□□ 1.06
CTSD-206ENST00000497544 NFE2L3Q9Y4A8 694 aa21.67■■□□□ 1.06
CTSD-206ENST00000497544 PDCD11Q14690 1871 aaKnown RBP21.66■■□□□ 1.06
CTSD-206ENST00000497544 SPTBN4Q9H254 2564 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.06
CTSD-206ENST00000497544 TMEM191BP0C7N4 346 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 LAG3P18627 525 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 ALDH7A1P49419 539 aaKnown RBP21.66■■□□□ 1.06
CTSD-206ENST00000497544 BFSP1Q12934 665 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 DUOXA2Q1HG44 320 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 LMBRD2Q68DH5 695 aaPredicted RBP21.66■■□□□ 1.06
CTSD-206ENST00000497544 WDR49Q8IV35 697 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 EFCAB13Q8IY85 973 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 COLGALT2Q8IYK4 626 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 C18orf25Q96B23 403 aaPredicted RBP21.66■■□□□ 1.06
CTSD-206ENST00000497544 BORCS6Q96GS4 357 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 POP1Q99575 1024 aaKnown RBP21.66■■□□□ 1.06
CTSD-206ENST00000497544 CGRRF1Q99675 332 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 TMEM175Q9BSA9 504 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 INTS13Q9NVM9 706 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 HCSTQ9UBK5 93 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 FAN1Q9Y2M0 1017 aa21.66■■□□□ 1.06
CTSD-206ENST00000497544 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 CARNS1A5YM72 827 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 BECN2A8MW95 431 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 ARHGEF15O94989 841 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 TNNC2P02585 160 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 CYP3A5P20815 502 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 OR1G1P47890 313 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 ZNF445P59923 1031 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 ENPEPQ07075 957 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 DSC1Q08554 894 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 NAB2Q15742 525 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 TCERG1LQ5VWI1 586 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 AOPEPQ8N6M6 819 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 PLEKHO2Q8TD55 490 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 ARNTL2Q8WYA1 636 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms