RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 CYP24A1Q07973 514 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 EDRF1Q3B7T1 1238 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 ANKRD40Q6AI12 368 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 FUT10Q6P4F1 479 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 TAS1R1Q7RTX1 841 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 NT5DC4Q86YG4 428 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 VPS52Q8N1B4 723 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 DHTKD1Q96HY7 919 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-220ENST00000497506 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-220ENST00000497506 ZBP1Q9H171 429 aa17.57■□□□□ 0.4
FAM3A-220ENST00000497506 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 PSMA7O14818 248 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 B3GAT3O94766 335 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 CSPG5O95196 566 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 SOD2P04179 222 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 NR2F2P24468 414 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 CCNE1P24864 410 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 PPP1R2P41236 205 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 STIM1Q13586 685 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 PSMD6Q15008 389 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 SURF1Q15526 300 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 PDE12Q6L8Q7 609 aaKnown RBP17.56■□□□□ 0.4
FAM3A-220ENST00000497506 RBM43Q6ZSC3 357 aaKnown RBP17.56■□□□□ 0.4
FAM3A-220ENST00000497506 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 BEST2Q8NFU1 509 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 FAM84AQ96KN4 292 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 TCF25Q9BQ70 676 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 HERC2P3Q9BVR0 1158 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
FAM3A-220ENST00000497506 VWA8A3KMH1 1905 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 TRIM49BA6NDI0 452 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 AKAP3O75969 853 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 CTSAP10619 480 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 RPL13P26373 211 aaKnown RBP17.55■□□□□ 0.4
FAM3A-220ENST00000497506 TFAMQ00059 246 aaKnown RBP17.55■□□□□ 0.4
FAM3A-220ENST00000497506 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 ADAM9Q13443 819 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 ZC3H3Q8IXZ2 948 aaKnown RBP17.55■□□□□ 0.4
FAM3A-220ENST00000497506 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 NSUN3Q9H649 340 aaKnown RBP17.55■□□□□ 0.4
FAM3A-220ENST00000497506 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
FAM3A-220ENST00000497506 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 CHST7Q9NS84 486 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 INTS13Q9NVM9 706 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 DPP3Q9NY33 737 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 SCN1AP35498 2009 aa17.55■□□□□ 0.4
FAM3A-220ENST00000497506 SF3B1O75533 1304 aaKnown RBP eCLIP17.54■□□□□ 0.43e-6■■■■■ 137.9
FAM3A-220ENST00000497506 HIDE1A8MVS5 230 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 TULP1O00294 542 aaPredicted RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 PIRO00625 290 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 PPEF2O14830 753 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 MAPK13O15264 365 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 LILRB3O75022 631 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 BRCC3P46736 316 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 TCEAL5Q5H9L2 206 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 KIAA0319Q5VV43 1072 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 PLPP4Q5VZY2 271 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 C9orf57Q5W0N0 161 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 SCARA3Q6AZY7 606 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 KLHL10Q6JEL2 608 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 ADGRD2Q7Z7M1 963 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 WDR49Q8IV35 697 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 MICALL1Q8N3F8 863 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 MRPL43Q8N983 215 aaKnown RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 OR5B17Q8NGF7 314 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 CXorf38Q8TB03 319 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 PARD3BQ8TEW8 1205 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 CACTINQ8WUQ7 758 aaKnown RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 NELFBQ8WX92 580 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 CCDC127Q96BQ5 260 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 POP1Q99575 1024 aaKnown RBP17.54■□□□□ 0.4
FAM3A-220ENST00000497506 CGRRF1Q99675 332 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 TSG101Q99816 390 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 FRMD4BQ9Y2L6 1034 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 REV3LO60673 3130 aa17.54■□□□□ 0.4
FAM3A-220ENST00000497506 I3L4J1 428 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 CXCL14O95715 111 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 DLATP10515 647 aaKnown RBP17.53■□□□□ 0.4
FAM3A-220ENST00000497506 CLDN10P78369 228 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 ELAVL2Q12926 359 aaKnown RBP17.53■□□□□ 0.4
FAM3A-220ENST00000497506 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
FAM3A-220ENST00000497506 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 USP41Q3LFD5 358 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 FAM171A1Q5VUB5 890 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 TTI2Q6NXR4 508 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 FOXR2Q6PJQ5 311 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 C1orf127Q8N9H9 656 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-220ENST00000497506 ZNF516Q92618 1163 aa17.53■□□□□ 0.4
FAM3A-220ENST00000497506 EEF2KMTQ96G04 330 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms