RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 MRPL17Q9NRX2 175 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
HLA-B-254ENST00000497377 DERAQ9Y315 318 aa12.47□□□□□ -0.41
HLA-B-254ENST00000497377 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 KLRC4O43908 158 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 B3GAT3O94766 335 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 IL18RAPO95256 599 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 RPN1P04843 607 aaKnown RBP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 CYP3A5P20815 502 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 CASP1P29466 404 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 TNFSF9P41273 254 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 GLUD2P49448 558 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 CREMQ03060 361 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 ADAM15Q13444 863 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 ZBTB6Q15916 424 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 UPP1Q16831 310 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 USP41Q3LFD5 358 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 PUS10Q3MIT2 529 aaKnown RBP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 SEZ6Q53EL9 994 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 ARMCX5Q6P1M9 558 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 PDXDC1Q6P996 788 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 HS2ST1Q7LGA3 356 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 HPS3Q969F9 1004 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 TIGD1Q96MW7 591 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 ASB2Q96Q27 587 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 EMILIN2Q9BXX0 1053 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 IGFLR1Q9H665 355 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 CLDND1Q9NY35 253 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 HOOK1Q9UJC3 728 aaKnown RBP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
HLA-B-254ENST00000497377 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
HLA-B-254ENST00000497377 A0A0C4DFX4 3053 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 HIDE1A8MVS5 230 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 TISP43B9A030 160 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 MEFVO15553 781 aaPredicted RBP12.45□□□□□ -0.42
HLA-B-254ENST00000497377 EXTL3O43909 919 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 LILRB3O75022 631 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 RHOBTB3O94955 611 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KIF20AO95235 890 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KIF4AO95239 1232 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 C1RP00736 705 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KCNA5P22460 613 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 PAX3P23760 479 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 CA8P35219 290 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 ACOT2P49753 483 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 CLCNKBP51801 687 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 DSG1Q02413 1049 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 DPYDQ12882 1025 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KCNB1Q14721 858 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KMT5BQ4FZB7 885 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 TJAP1Q5JTD0 557 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 ZBTB41Q5SVQ8 909 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 RBM23Q86U06 439 aaKnown RBP12.45□□□□□ -0.42
HLA-B-254ENST00000497377 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
HLA-B-254ENST00000497377 GLIS3Q8NEA6 775 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 ENGASEQ8NFI3 743 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 GOLGA5Q8TBA6 731 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 PAAF1Q9BRP4 392 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 FAM50BQ9Y247 325 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 C2CD2Q9Y426 696 aa12.45□□□□□ -0.42
HLA-B-254ENST00000497377 ANK1P16157 1881 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 F8W810 466 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 PODXLO00592 558 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 PER2O15055 1255 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 LRPAP1P30533 357 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 HOXD13P35453 343 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 NDUFV1P49821 464 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 SOX4Q06945 474 aaPredicted RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 KCNC3Q14003 757 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 CRELD2Q6UXH1 353 aaPredicted RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 C12orf56Q8IXR9 622 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 BEST2Q8NFU1 509 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 CASP10Q92851 521 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 C18orf25Q96B23 403 aaPredicted RBP12.44□□□□□ -0.42
HLA-B-254ENST00000497377 CBWD1Q9BRT8 395 aa12.44□□□□□ -0.42
HLA-B-254ENST00000497377 FAM213AQ9BRX8 229 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms