RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 RAB6AP20340 208 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 AOAHP28039 575 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 NOS3P29474 1203 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 RFC4P35249 363 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIR2DL1P43626 348 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIR2DL2P43627 348 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARFIP2P53365 341 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 RAB1AP62820 205 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 HTRA4P83105 476 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CYP27A1Q02318 531 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ICA1Q05084 483 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 LMOD3Q0VAK6 560 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRIM28Q13263 835 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ITPK1Q13572 414 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 BLMHQ13867 455 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 DAG1Q14118 895 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRIM25Q14258 630 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYBPC3Q14896 1274 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ACAP2Q15057 778 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 AOC3Q16853 763 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CYP27C1Q4G0S4 372 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 EMC10Q5UCC4 262 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 WDR78Q5VTH9 848 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PAOXQ6QHF9 649 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 LYPD4Q6UWN0 246 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CEP68Q76N32 757 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRIM48Q8IWZ4 208 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 GRAMD1CQ8IYS0 662 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLASRPQ8N2M8 674 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 NKAIN3Q8N8D7 197 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 VPS37AQ8NEZ2 397 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 OR14C36Q8NHC7 312 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PLBD2Q8NHP8 589 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLC30A5Q8TAD4 765 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KLHDC4Q8TBB5 520 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PIP4K2CQ8TBX8 421 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ASB15Q8WXK1 588 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 RTF1Q92541 710 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 USP13Q92995 863 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ERO1AQ96HE7 468 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 UIMC1Q96RL1 719 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 DMRTA2Q96SC8 542 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 TBCBQ99426 244 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 LSM14BQ9BX40 385 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 JAM3Q9BX67 310 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PLVAPQ9BX97 442 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 STK33Q9BYT3 514 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KCTD10Q9H3F6 313 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRDM12Q9H4Q4 367 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 SP110Q9HB58 689 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 KMT5AQ9NQR1 393 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLIC5Q9NZA1 410 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 NOP53Q9NZM5 478 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ASH2LQ9UBL3 628 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRSS50Q9UI38 385 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 FBXO2Q9UK22 296 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 ACSL6Q9UKU0 697 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 DOT1LQ8TEK3 1739 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 DMDP11532 3685 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 CPSF1Q10570 1443 aaKnown RBP2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYOM3Q5VTT5 1437 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 DLEC1Q9Y238 1755 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 RPGRIP1LQ68CZ1 1315 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 COL4A5P29400 1685 aa2.92□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYO9BQ13459 2157 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 ITPR1Q14643 2758 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EIF3AQ14152 1382 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 ATRNL1Q5VV63 1379 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 A0A0A6YYJ9 748 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 UBA6A0AVT1 1052 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EYA2O00167 538 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SYT5O00445 386 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PHGDHO43175 533 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 EPB41L2O43491 1005 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 GAS2O43903 313 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MPIG6BO95866 241 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 GJB1P08034 283 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 FTH1P19P0C7X4 201 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 DHRS4L1P0CG22 281 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 OSMP13725 252 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CAPN3P20807 821 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PDIA3P30101 505 aaKnown RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MAP2K6P52564 334 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 BCAR1P56945 870 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MPP1Q00013 466 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 MEF2AQ02078 507 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPP3CAQ08209 521 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 GALNT1Q10472 559 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 SPIDRQ14159 915 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 LLGL1Q15334 1064 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CT83Q5H943 113 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 TTC38Q5R3I4 469 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 RETSATQ6NUM9 610 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 CFAP161Q6P656 301 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 C16orf54Q6UWD8 224 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 BTNL9Q6UXG8 535 aa2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PDZD4Q76G19 769 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP2-201ENST00000497342 TTC7BQ86TV6 843 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms