RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 SCGB1D1O95968 90 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PRLP01236 227 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TK1P04183 234 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ANXA2P07355 339 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 SLC3A2P08195 630 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 HNRNPA1P09651 372 aaKnown RBP eCLIP2.16□□□□□ -2.06
UBR4-217ENST00000497018 TSPY3P0CV98 308 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TSPY8P0CW00 308 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ZSCAN22P10073 491 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 KITP10721 976 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 RARBP10826 455 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 GNAT1P11488 350 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 COL6A2P12110 1019 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 MYCLP12524 364 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 BRAFP15056 766 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 VAV1P15498 845 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ALOX15P16050 662 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 ALOX12P18054 663 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PAMP19021 973 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TM4SF1P30408 202 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CD68P34810 354 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 THBS2P35442 1172 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ACTN2P35609 894 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 AFMP43652 599 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CCT4P50991 539 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 PRKAA2P54646 552 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 EPHA5P54756 1037 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SUMO3P55854 103 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 LGALS4P56470 323 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SNX16P57768 344 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 RPS16P62249 146 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 RPL11P62913 178 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 CCT2P78371 535 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 IFI35P80217 286 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 TSPY1Q01534 308 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 UBE3AQ05086 875 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SOX4Q06945 474 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 CHRNDQ07001 517 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 FSTL1Q12841 308 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TARDBPQ13148 414 aaKnown RBP eCLIP2.16□□□□□ -2.06
UBR4-217ENST00000497018 MAPK7Q13164 816 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PPP2R5CQ13362 524 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ACVR2BQ13705 512 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 COL9A3Q14050 684 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 SPIDRQ14159 915 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 DCTN1Q14203 1278 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PSMD6Q15008 389 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 DLGAP5Q15398 846 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TARBP2Q15633 366 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 ATP2B3Q16720 1220 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TIGD6Q17RP2 521 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 DNAJC21Q5F1R6 531 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 ZNF362Q5T0B9 420 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 THEMIS2Q5TEJ8 643 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 NUTM2GQ5VZR2 741 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CWF19L1Q69YN2 538 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 CIAPIN1Q6FI81 312 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ACAD10Q6JQN1 1059 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TATDN1Q6P1N9 297 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 BORAQ6PGQ7 559 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CASC1Q6TDU7 716 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 KIAA1211Q6ZU35 1233 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 C22orf34Q6ZV56 151 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 B4GALNT4Q76KP1 1039 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 MICU3Q86XE3 530 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 NME9Q86XW9 330 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PHYKPLQ8IUZ5 450 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SP8Q8IXZ3 490 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SMYD4Q8IYR2 804 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 CARNMT1Q8N4J0 409 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 DTWD1Q8N5C7 304 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 NGEFQ8N5V2 710 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TEX9Q8N6V9 391 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ZNF655Q8N720 491 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 C2CD4AQ8NCU7 369 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 FLCNQ8NFG4 579 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 PIP4K2CQ8TBX8 421 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 DPF2Q92785 391 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 HDAC10Q969S8 669 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TRIM43Q96BQ3 446 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 IQCDQ96DY2 449 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 HIC2Q96JB3 615 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 FAM167AQ96KS9 214 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 TRIM47Q96LD4 638 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 FDXACB1Q9BRP7 624 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 GPATCH1Q9BRR8 931 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 PI4K2AQ9BTU6 479 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 MYL10Q9BUA6 226 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SENP6Q9GZR1 1112 aaPredicted RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 PAIP1Q9H074 479 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 ABCG4Q9H172 646 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 C2orf40Q9H1Z8 148 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CXorf56Q9H5V9 222 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ACSS3Q9H6R3 686 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 ARMT1Q9H993 441 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SMURF2Q9HAU4 748 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 CYP4F12Q9HCS2 524 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 SSU72Q9NP77 194 aaKnown RBP2.16□□□□□ -2.06
UBR4-217ENST00000497018 SAYSD1Q9NPB0 183 aa2.16□□□□□ -2.06
UBR4-217ENST00000497018 NECTIN3Q9NQS3 549 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms