RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 PARVGQ9HBI0 331 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 DUSP12Q9UNI6 340 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 BACE2Q9Y5Z0 518 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 H0YCG3 227 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 HNRNPDLO14979 420 aaKnown RBP16.46■□□□□ 0.23
NEK4-206ENST00000496822 TRAPPC3O43617 180 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 TRAK2O60296 914 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 FAM189A1O60320 539 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 PIGRP01833 764 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 KRT18P05783 430 aaKnown RBP16.46■□□□□ 0.23
NEK4-206ENST00000496822 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEK4-206ENST00000496822 NMT1P30419 496 aaKnown RBP16.46■□□□□ 0.23
NEK4-206ENST00000496822 HOXA9P31269 272 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 LIG4P49917 911 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 VARS2Q5ST30 1063 aaKnown RBP16.46■□□□□ 0.23
NEK4-206ENST00000496822 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.23
NEK4-206ENST00000496822 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 HCFC1R1Q9NWW0 138 aa16.46■□□□□ 0.23
NEK4-206ENST00000496822 PDCD11Q14690 1871 aaKnown RBP16.46■□□□□ 0.22
NEK4-206ENST00000496822 CITO14578 2027 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 TISP43B9A030 160 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 CLTAP09496 248 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 LAMP2P13473 410 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 FSHRP23945 695 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 GUCY2FP51841 1108 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 ROR1Q01973 937 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 ALYREFQ86V81 257 aaKnown RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 TMEM105Q8N8V8 129 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 INTS4Q96HW7 963 aaKnown RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 USP28Q96RU2 1077 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 IGSF9Q9P2J2 1179 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 POLIQ9UNA4 740 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 NUB1Q9Y5A7 615 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 SRPRBQ9Y5M8 271 aaKnown RBP16.45■□□□□ 0.22
NEK4-206ENST00000496822 DOCK8Q8NF50 2099 aa16.45■□□□□ 0.22
NEK4-206ENST00000496822 WDR27A2RRH5 827 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 TBC1D4O60343 1298 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 RPL9P32969 192 aaKnown RBP16.44■□□□□ 0.22
NEK4-206ENST00000496822 MCM4P33991 863 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 DDIT3P35638 169 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 PTPN5P54829 565 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
NEK4-206ENST00000496822 ZC2HC1CQ53FD0 456 aaPredicted RBP16.44■□□□□ 0.22
NEK4-206ENST00000496822 SLC8B1Q6J4K2 584 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 MAP4K3Q8IVH8 894 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 SLC44A3Q8N4M1 653 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 ITFG1Q8TB96 612 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 SUSD3Q96L08 255 aa16.44■□□□□ 0.22
NEK4-206ENST00000496822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEK4-206ENST00000496822 A0A0B4J269 797 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 LACTBL1A8MY62 500 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 ANKRD63C9JTQ0 380 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 ANHXE9PGG2 379 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 PPEF2O14830 753 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 SYN3O14994 580 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 OGTO15294 1046 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 XYLBO75191 536 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 CFHP08603 1231 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 NPR3P17342 541 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 ARPP19P56211 112 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 GTF2BQ00403 316 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 PPP2R3AQ06190 1150 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 HTR4Q13639 388 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 MRPL58Q14197 206 aaKnown RBP16.43■□□□□ 0.22
NEK4-206ENST00000496822 ZBTB6Q15916 424 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
NEK4-206ENST00000496822 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 NUMBLQ9Y6R0 609 aa16.43■□□□□ 0.22
NEK4-206ENST00000496822 DOCK6Q96HP0 2047 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 A0A087X0B3 334 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 MYMKA6NI61 221 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 STX6O43752 255 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 POU2F2P09086 479 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 LRPAP1P30533 357 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 MRE11P49959 708 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 ASTLQ6HA08 431 aaPredicted RBP16.42■□□□□ 0.22
NEK4-206ENST00000496822 SIX5Q8N196 739 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 FLCNQ8NFG4 579 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 DDX12PQ92771 950 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 FGF13Q92913 245 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 PRRX2Q99811 253 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
NEK4-206ENST00000496822 RPP25Q9BUL9 199 aaKnown RBP16.42■□□□□ 0.22
NEK4-206ENST00000496822 FAM86C1Q9NVL1 165 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms