RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 HAUS4Q9H6D7 363 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 ADGRG1Q9Y653 693 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 EPN1Q9Y6I3 576 aaPredicted RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 RECQL4O94761 1208 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 TFRCP02786 760 aaKnown RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 SERPING1P05155 500 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 HSPA1AP0DMV8 641 aaKnown RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 HSPA1BP0DMV9 641 aaKnown RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 MYL6P60660 151 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 CYP27A1Q02318 531 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 LPIN1Q14693 890 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 IRF2BP2Q7Z5L9 587 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 ZNF333Q96JL9 665 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 C16orf45Q96MC5 204 aaPredicted RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 APOBEC3GQ9HC16 384 aaKnown RBP18.19■□□□□ 0.5
LMNA-216ENST00000496738 PARP2Q9UGN5 583 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 IPPQ9Y573 584 aa18.19■□□□□ 0.5
LMNA-216ENST00000496738 FAM170AA1A519 330 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 CDK17Q00537 523 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 PAK2Q13177 524 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 TMEM132DQ14C87 1099 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 KIF12Q96FN5 646 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 PADI3Q9ULW8 664 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 TFR2Q9UP52 801 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 EVI5O60447 810 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 PQBP1O60828 265 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 RPLP2P05387 115 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 CCDC175P0C221 793 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 KIF11P52732 1056 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 AP3M2P53677 418 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 MFAP3P55082 362 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 TRPC3Q13507 836 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 C1orf127Q8N9H9 656 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 SMG8Q8ND04 991 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 SNX27Q96L92 541 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.18■□□□□ 0.5
LMNA-216ENST00000496738 ASB7Q9H672 318 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 REXO2Q9Y3B8 237 aaKnown RBP18.18■□□□□ 0.5
LMNA-216ENST00000496738 NUB1Q9Y5A7 615 aa18.18■□□□□ 0.5
LMNA-216ENST00000496738 AKR1B10O60218 316 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 ITGB3P05106 788 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 RFX1P22670 979 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 CYLC1P35663 651 aaPredicted RBP18.17■□□□□ 0.5
LMNA-216ENST00000496738 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
LMNA-216ENST00000496738 PTK2Q05397 1052 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
LMNA-216ENST00000496738 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
LMNA-216ENST00000496738 ZMAT2Q96NC0 199 aaKnown RBP18.17■□□□□ 0.5
LMNA-216ENST00000496738 ERVK-5Q9HDB9 667 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 MYO6Q9UM54 1294 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 GPR182O15218 404 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 CDK7P50613 346 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 REXO1L1PQ8IX06 675 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 FAM126BQ8IXS8 530 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 ACP6Q9NPH0 428 aa18.17■□□□□ 0.5
LMNA-216ENST00000496738 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 ZNF263O14978 683 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 MGEA5O60502 916 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNA-216ENST00000496738 PSEN1P49768 467 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 ZNF571Q7Z3V5 609 aaPredicted RBP18.16■□□□□ 0.5
LMNA-216ENST00000496738 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 LZTFL1Q9NQ48 299 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 SIX4Q9UIU6 781 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 PCDHB2Q9Y5E7 798 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 CITO14578 2027 aa18.16■□□□□ 0.5
LMNA-216ENST00000496738 ZSCAN12O43309 604 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 SGPL1O95470 568 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 FERP16591 822 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
LMNA-216ENST00000496738 MBTPS1Q14703 1052 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 FAM26DQ5JW98 314 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 CCDC170Q8IYT3 715 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 TUBGCP4Q9UGJ1 667 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 CALCAP01258 141 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 SCARA5Q6ZMJ2 495 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 LPPQ93052 612 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
LMNA-216ENST00000496738 FAM105AQ9NUU6 356 aa18.15■□□□□ 0.5
LMNA-216ENST00000496738 ABL1P00519 1130 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 ASS1P00966 412 aaKnown RBP18.14■□□□□ 0.5
LMNA-216ENST00000496738 KRT5P13647 590 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 POLR2BP30876 1174 aaKnown RBP18.14■□□□□ 0.5
LMNA-216ENST00000496738 CBX1P83916 185 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.5
LMNA-216ENST00000496738 ASTE1Q2TB18 679 aaPredicted RBP18.14■□□□□ 0.5
LMNA-216ENST00000496738 ZNF699Q32M78 642 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 RNF169Q8NCN4 708 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 SHC3Q92529 594 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 DPP3Q9NY33 737 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 ADAMTS1Q9UHI8 967 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 DAAM1Q9Y4D1 1078 aa18.14■□□□□ 0.5
LMNA-216ENST00000496738 SSU72P8A0A1W2PR75 194 aa18.14■□□□□ 0.49
LMNA-216ENST00000496738 EIF3CLB5ME19 914 aaKnown RBP18.14■□□□□ 0.49
LMNA-216ENST00000496738 CYP26A1O43174 497 aa18.14■□□□□ 0.49
LMNA-216ENST00000496738 CTCFP49711 727 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms