RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MARCKSP29966 332 aaPredicted RBP15.59■□□□□ 0.09
VTI1A-209ENST00000496445 AVPR2P30518 371 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 HOXA9P31269 272 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 TNFSF9P41273 254 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 NTHL1P78549 312 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 TDGQ13569 410 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 SPECC1Q5M775 1068 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 ZBTB41Q5SVQ8 909 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 SLC39A4Q6P5W5 647 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 SLC7A14Q8TBB6 771 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 EPSTI1Q96J88 318 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 CCSER1Q9C0I3 900 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 PARVGQ9HBI0 331 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 TBX20Q9UMR3 447 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 BACE2Q9Y5Z0 518 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 HNRNPDLO14979 420 aaKnown RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 CCL16O15467 120 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 TRAPPC3O43617 180 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 HNRNPA1P09651 372 aaKnown RBP eCLIP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 SPAG1Q07617 926 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 PPM1LQ5SGD2 360 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 VARS2Q5ST30 1063 aaKnown RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 CWF19L1Q69YN2 538 aaKnown RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 ANKS3Q6ZW76 656 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 GRASPQ7Z6J2 395 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 MYCT1Q8N699 235 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 TMEM105Q8N8V8 129 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 RASSF8Q8NHQ8 419 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 BICD1Q96G01 975 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 INTS4Q96HW7 963 aaKnown RBP15.58■□□□□ 0.08
VTI1A-209ENST00000496445 CLIC6Q96NY7 704 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 PHOX2BQ99453 314 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 IGSF9Q9P2J2 1179 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 MTMR6Q9Y217 621 aa15.58■□□□□ 0.08
VTI1A-209ENST00000496445 TTC26A0AVF1 554 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 WDR27A2RRH5 827 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 TRAK2O60296 914 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 TBC1D4O60343 1298 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 KRT18P05783 430 aaKnown RBP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 POU2F2P09086 479 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 LAMP2P13473 410 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 FSHRP23945 695 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 RPL9P32969 192 aaKnown RBP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 LIG4P49917 911 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 PTPN5P54829 565 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 ROR1Q01973 937 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 SLC8B1Q6J4K2 584 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 HCFC1R1Q9NWW0 138 aa15.57■□□□□ 0.08
VTI1A-209ENST00000496445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 SRPRBQ9Y5M8 271 aaKnown RBP15.57■□□□□ 0.08
VTI1A-209ENST00000496445 ANHXE9PGG2 379 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 K7ELQ4 463 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 SYN3O14994 580 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 TBCAO75347 108 aaKnown RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 CLTAP09496 248 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 NPR3P17342 541 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 LRPAP1P30533 357 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 DDIT3P35638 169 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 GTF2BQ00403 316 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 CEBPZQ03701 1054 aaKnown RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 HTR4Q13639 388 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 MRPL58Q14197 206 aaKnown RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 ENOX2Q16206 610 aaKnown RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 ALYREFQ86V81 257 aaKnown RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 ST13P5Q8NFI4 369 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-209ENST00000496445 SUSD3Q96L08 255 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 USP28Q96RU2 1077 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 PRRX2Q99811 253 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 ZHX3Q9H4I2 956 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 PLEKHA5Q9HAU0 1116 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 COL4A3Q01955 1670 aa15.56■□□□□ 0.08
VTI1A-209ENST00000496445 A0A0B4J269 797 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 LACTBL1A8MY62 500 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 TISP43B9A030 160 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 OGTO15294 1046 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 XYLBO75191 536 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 ABLIM3O94929 683 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 ADRB2P07550 413 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 SCP2P22307 547 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 MCM4P33991 863 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 GUCY2FP51841 1108 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 PPP2R3AQ06190 1150 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 ZBTB6Q15916 424 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 ZC2HC1CQ53FD0 456 aaPredicted RBP15.55■□□□□ 0.08
VTI1A-209ENST00000496445 SLC44A3Q8N4M1 653 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 ITFG1Q8TB96 612 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 DDX12PQ92771 950 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 IKZF4Q9H2S9 585 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 DNMT3BQ9UBC3 853 aaKnown RBP15.55■□□□□ 0.08
VTI1A-209ENST00000496445 FBXL5Q9UKA1 691 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 POLIQ9UNA4 740 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 NUB1Q9Y5A7 615 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 NUMBLQ9Y6R0 609 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms