RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 PRC1O43663 620 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 KIF4AO95239 1232 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 CAPNS1P04632 268 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 CIITAP33076 1130 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 RFC5P40937 340 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 ATXN3P54252 364 aaPredicted RBP12.97□□□□□ -0.33
ATG3-209ENST00000496423 ANTXR2P58335 489 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 FCHO2Q0JRZ9 810 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 TFDP1Q14186 410 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 USP39Q53GS9 565 aaKnown RBP12.97□□□□□ -0.33
ATG3-209ENST00000496423 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
ATG3-209ENST00000496423 HDDC3Q8N4P3 179 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 CRYGNQ8WXF5 182 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 ZSWIM3Q96MP5 696 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 CYP4F11Q9HBI6 524 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 KLK14Q9P0G3 267 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
ATG3-209ENST00000496423 MAST4O15021 2626 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
ATG3-209ENST00000496423 EML5Q05BV3 1969 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 SPAARA0A1B0GVQ0 90 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 TSPAN1O60635 241 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 MYL4P12829 197 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 ATF2P15336 505 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 FGFR3P22607 806 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 GNA11P29992 359 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 DPP6P42658 865 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 PSMC5P62195 406 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 IRX4P78413 519 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
ATG3-209ENST00000496423 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 POTEHQ6S545 545 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 TCEAL8Q8IYN2 117 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 REXO1Q8N1G1 1221 aaKnown RBP12.96□□□□□ -0.33
ATG3-209ENST00000496423 CEP170P1Q96L14 293 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 NXF3Q9H4D5 531 aaKnown RBP12.96□□□□□ -0.33
ATG3-209ENST00000496423 THG1LQ9NWX6 298 aaKnown RBP12.96□□□□□ -0.33
ATG3-209ENST00000496423 EVLQ9UI08 416 aaPredicted RBP12.96□□□□□ -0.33
ATG3-209ENST00000496423 MAFFQ9ULX9 164 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
ATG3-209ENST00000496423 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 TMEM150BA6NC51 233 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 CAPN8A6NHC0 703 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 MSH4O15457 936 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 ABLIM3O94929 683 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 APBB3O95704 486 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 RAB44Q7Z6P3 723 aaPredicted RBP12.95□□□□□ -0.34
ATG3-209ENST00000496423 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 PAAF1Q9BRP4 392 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 GTSE1Q9NYZ3 720 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 LAMA1P25391 3075 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 PCNX2A6NKB5 2137 aa12.95□□□□□ -0.34
ATG3-209ENST00000496423 THADAQ6YHU6 1953 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 H7C4K7 107 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 SH2B2O14492 632 aaPredicted RBP12.94□□□□□ -0.34
ATG3-209ENST00000496423 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
ATG3-209ENST00000496423 NPTXRO95502 500 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
ATG3-209ENST00000496423 USP11P51784 963 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 DGKEP52429 567 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 PTENP60484 403 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 POU5F1BQ06416 359 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 PDAP1Q13442 181 aaKnown RBP12.94□□□□□ -0.34
ATG3-209ENST00000496423 FBXO43Q4G163 708 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 TRIM61Q5EBN2 209 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 ANO5Q75V66 913 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 PIGKQ92643 395 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 OBP2AQ9NY56 170 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
ATG3-209ENST00000496423 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
ATG3-209ENST00000496423 RAI2Q9Y5P3 530 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms