RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 BLIDQ8IZY5 108 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 SPATA5Q8NB90 893 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ITPKCQ96DU7 683 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 NSL1Q96IY1 281 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PLK2Q9NYY3 685 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 WHRNQ9P202 907 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 TACC3Q9Y6A5 838 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 TNKSO95271 1327 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 KANSL1LA0AUZ9 987 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ARHGAP10A1A4S6 786 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 TMEM110-MUSTN1A8MSY1 372 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 PRPF4O43172 522 aaKnown RBP eCLIP9.62□□□□□ -0.87
HPS4-217ENST00000496385 DNAJC6O75061 913 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 SUPT3HO75486 399 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 SPATA31D3P0C874 917 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 IL1R1P14778 569 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 RPL5P46777 297 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 PPATQ06203 517 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 CALCOCO2Q13137 446 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 MED21Q13503 144 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 CYP1B1Q16678 543 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 LONRF1Q17RB8 773 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 MFSD14BQ5SR56 506 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 DACT2Q5SW24 774 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 FYB2Q5VWT5 728 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 OLFML2BQ68BL8 750 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 DUS1LQ6P1R4 473 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 RFWD3Q6PCD5 774 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 SPATA31D4Q6ZUB0 917 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 SV2BQ7L1I2 683 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 TMEM110Q86TL2 294 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 TRIM59Q8IWR1 403 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 VPS52Q8N1B4 723 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 FNDC8Q8TC99 324 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 DQX1Q8TE96 717 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 DDX12PQ92771 950 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 GLG1Q92896 1179 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 DDX50Q9BQ39 737 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 CDC42EP4Q9H3Q1 356 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 SENP1Q9P0U3 644 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 R3HDM2Q9Y2K5 976 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 CNTNAP5Q8WYK1 1306 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 A6NJR5 290 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 GSG1L2A8MUP6 293 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 FKBP6O75344 327 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 TTC4O95801 387 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 GH1P01241 217 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ALDH2P05091 517 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 MTTPP55157 894 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ORC2Q13416 577 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 KYNUQ16719 465 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 CLPPQ16740 277 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 TRMT5Q32P41 509 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 GRAMD4Q6IC98 578 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 AAGABQ6PD74 315 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 BORAQ6PGQ7 559 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 IZUMO2Q6UXV1 221 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 NET1Q7Z628 596 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 GAB3Q8WWW8 586 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 RFFLQ8WZ73 363 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 PTCD3Q96EY7 689 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 ABHD8Q96I13 439 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 VPS33BQ9H267 617 aa9.62□□□□□ -0.87
HPS4-217ENST00000496385 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
HPS4-217ENST00000496385 E9PBE3 544 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 LGR5O75473 907 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 IDH1O75874 414 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 TMEM253P0C7T8 217 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 CDK4P11802 303 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 ETS2P15036 469 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 ANPEPP15144 967 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 EMP3P54852 163 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 TROAPQ12815 778 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 STAT4Q14765 748 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 TNIP1Q15025 636 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 C1orf228Q6PIY5 440 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 NLRP9Q7RTR0 991 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 SLC15A3Q8IY34 581 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 GPC2Q8N158 579 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 BBS5Q8N3I7 341 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 SLCO2A1Q92959 643 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 CALML4Q96GE6 196 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 TTC25Q96NG3 672 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 SIKE1Q9BRV8 207 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 TCHPQ9BT92 498 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 EIF2AQ9BY44 585 aaKnown RBP9.61□□□□□ -0.87
HPS4-217ENST00000496385 NRDE2Q9H7Z3 1164 aa9.61□□□□□ -0.87
HPS4-217ENST00000496385 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms