RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HNRNPA1P09651 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDAC4-213ENST00000496347 GAP43P17677 238 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 TKTP29401 623 aaKnown RBP17.14■□□□□ 0.33
HDAC4-213ENST00000496347 STAT6P42226 847 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 STK38Q15208 465 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 RTL10Q7L3V2 364 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 FEZF2Q8TBJ5 459 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 ZNF396Q96N95 335 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-213ENST00000496347 PRKD2Q9BZL6 878 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 HAPLN2Q9GZV7 340 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 TSC2P49815 1807 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 A0A0B4J269 797 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 XPOTO43592 962 aaKnown RBP17.13■□□□□ 0.33
HDAC4-213ENST00000496347 YEATS4O95619 227 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 SPATA31D3P0C874 917 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 RAB33AQ14088 237 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 SPATA31D4Q6ZUB0 917 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 SV2BQ7L1I2 683 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 SFR1Q86XK3 245 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 DDX12PQ92771 950 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-213ENST00000496347 ASIC4Q96FT7 647 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 MSTO1Q9BUK6 570 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 KCNH6Q9H252 994 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 TUBGCP4Q9UGJ1 667 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
HDAC4-213ENST00000496347 NUB1Q9Y5A7 615 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 DOCK6Q96HP0 2047 aa17.13■□□□□ 0.33
HDAC4-213ENST00000496347 SPTLC2O15270 562 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 PPP6R2O75170 966 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 PPP1R37O75864 691 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 C8AP07357 584 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 CYP3A5P20815 502 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
HDAC4-213ENST00000496347 PLA2G5P39877 138 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 ENOX2Q16206 610 aaKnown RBP17.12■□□□□ 0.33
HDAC4-213ENST00000496347 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 CD302Q8IX05 232 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 SUSD3Q96L08 255 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
HDAC4-213ENST00000496347 PIDD1Q9HB75 910 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 EPS15L1Q9UBC2 864 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 CDY1Q9Y6F8 540 aa17.12■□□□□ 0.33
HDAC4-213ENST00000496347 FRMD3A2A2Y4 597 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 MYMKA6NI61 221 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 I3L4J1 428 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 ADAM12O43184 909 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 XYLBO75191 536 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 ADRB2P07550 413 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 IGFBP6P24592 240 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-213ENST00000496347 LRPAP1P30533 357 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 MCM4P33991 863 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 OR1D2P34982 312 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 TNFSF9P41273 254 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 BRCC3P46736 316 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
HDAC4-213ENST00000496347 ALCAMQ13740 583 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 VARS2Q5ST30 1063 aaKnown RBP17.11■□□□□ 0.33
HDAC4-213ENST00000496347 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
HDAC4-213ENST00000496347 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 CUEDC2Q9H467 287 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC4-213ENST00000496347 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
HDAC4-213ENST00000496347 A0A087X0B3 334 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 H7C4K7 107 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ASGR2P07307 311 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ZSCAN22P10073 491 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-213ENST00000496347 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ZBTB41Q5SVQ8 909 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 APPL2Q8NEU8 664 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 PBXIP1Q96AQ6 731 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 MRPL44Q9H9J2 332 aaKnown RBP17.1■□□□□ 0.33
HDAC4-213ENST00000496347 IGSF9Q9P2J2 1179 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 LIMD1Q9UGP4 676 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 CPSF3Q9UKF6 684 aaKnown RBP17.1■□□□□ 0.33
HDAC4-213ENST00000496347 EXOC7Q9UPT5 735 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 DERAQ9Y315 318 aa17.1■□□□□ 0.33
HDAC4-213ENST00000496347 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
HDAC4-213ENST00000496347 F13A1P00488 732 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 MYBP10242 640 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 GBP2P32456 591 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-213ENST00000496347 ROR1Q01973 937 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms