RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TBC1D22BQ9NU19 505 aa10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 SUCLA2Q9P2R7 463 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-213ENST00000496037 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 SPECC1L-ADORA2AF8WAN1 911 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF197O14709 1029 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 LRG1P02750 347 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 PTPN2P17706 415 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 GBP1P32455 592 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 CTHP32929 405 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 SOX9P48436 509 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 GNAQP50148 359 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 SETQ01105 290 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZNF423Q2M1K9 1284 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 MTERF2Q49AM1 385 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 PDZD4Q76G19 769 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 DSCC1Q9BVC3 393 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 RAXQ9Y2V3 346 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 IPPQ9Y573 584 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 RAI2Q9Y5P3 530 aa10.72□□□□□ -0.69
SMARCAL1-213ENST00000496037 WDR27A2RRH5 827 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 ARNTLO00327 626 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 ATG13O75143 517 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 C1QL1O75973 258 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 DDAH1O94760 285 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 VAMP1P23763 118 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 MYH9P35579 1960 aaKnown RBP10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 SREBF1P36956 1147 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 VIPR2P41587 438 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 COPS2P61201 443 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 LMAN2Q12907 356 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 CCINQ13939 588 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 RAB33AQ14088 237 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 PON2Q15165 354 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 UBXN11Q5T124 520 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 CYP2U1Q7Z449 544 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 RALYLQ86SE5 291 aaKnown RBP10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 MFSD6LQ8IWD5 586 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 LNX1Q8TBB1 728 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 RILPL2Q969X0 211 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 MAP3K14Q99558 947 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
SMARCAL1-213ENST00000496037 MYBPHLA2RUH7 354 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 FAM86B1E9PN63 330 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 J3QKU1 62 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 ADAM12O43184 909 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 MICAL2O94851 1124 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 PLEKHA8P1O95397 391 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 FAM86B2P0C5J1 330 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 OR1D2P34982 312 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 MAPK8P45983 427 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 ELAVL2Q12926 359 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 GRIK3Q13003 919 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 AP3B2Q13367 1082 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 WDR44Q5JSH3 913 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 PRSS36Q5K4E3 855 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 TXNDC11Q6PKC3 985 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 RAB44Q7Z6P3 723 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 C11orf74Q86VG3 221 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 KSR1Q8IVT5 923 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 TEX2Q8IWB9 1127 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 CAMKK1Q8N5S9 505 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 SMG8Q8ND04 991 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 MDM1Q8TC05 714 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 E2F7Q96AV8 911 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 HNRNPABQ99729 332 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 DIAPH3Q9NSV4 1193 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 MIOSQ9NXC5 875 aa10.7□□□□□ -0.7
SMARCAL1-213ENST00000496037 NOTCH4Q99466 2003 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 hCG_1642624A0A1W2PR95 340 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HEPACAM2A8MVW5 462 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 PATE3B3GLJ2 98 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 PRRG1O14668 218 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 CHADO15335 359 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 ERLIN2O94905 339 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 SDSP20132 328 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 ELF1P32519 619 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 ADCY7P51828 1080 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 PDE1AP54750 535 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 NAPAP54920 295 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 SPIRE1Q08AE8 756 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 CYP4A22Q5TCH4 519 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HAUS6Q7Z4H7 955 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZNF654Q8IZM8 581 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HDDC3Q8N4P3 179 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms