RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 TARDBPQ13148 414 aaKnown RBP eCLIP7.29□□□□□ -1.24
CCDC39-207ENST00000495817 CNGB1Q14028 1251 aaPredicted RBP7.29□□□□□ -1.24
CCDC39-207ENST00000495817 CNN3Q15417 329 aaKnown RBP7.29□□□□□ -1.24
CCDC39-207ENST00000495817 NRN1LQ496H8 165 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 CCDC157Q569K6 752 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 MAEAQ7L5Y9 396 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 RSPH3Q86UC2 560 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 FAM83AQ86UY5 434 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 TMPRSS6Q8IU80 811 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 C1orf210Q8IVY1 113 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 EXOC8Q8IYI6 725 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 KRT78Q8N1N4 520 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 PQLC1Q8N2U9 271 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 NAA15Q9BXJ9 866 aaKnown RBP7.29□□□□□ -1.24
CCDC39-207ENST00000495817 EPC1Q9H2F5 836 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 BHMT2Q9H2M3 363 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 LANCL2Q9NS86 450 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
CCDC39-207ENST00000495817 FRS3O43559 492 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 RABGGTBP53611 331 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 AK2P54819 239 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 RAB1AP62820 205 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 NKX6-1P78426 367 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 FGL2Q14314 439 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 RRP1BQ14684 758 aaKnown RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 MIIPQ5JXC2 388 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 CERS3Q8IU89 383 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 LILRA3Q8N6C8 439 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 IL17DQ8TAD2 202 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 CASKIN2Q8WXE0 1202 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 LRTOMTQ8WZ04 291 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 EXTL1Q92935 676 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 GJA10Q969M2 543 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 MTFMTQ96DP5 389 aaKnown RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 UHRF1Q96T88 793 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-207ENST00000495817 GPR87Q9BY21 358 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 NUP62CLQ9H1M0 184 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 LMBRD1Q9NUN5 540 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 PARPBPQ9NWS1 579 aa7.28□□□□□ -1.24
CCDC39-207ENST00000495817 MGEA5O60502 916 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 PQBP1O60828 265 aaKnown RBP7.27□□□□□ -1.25
CCDC39-207ENST00000495817 STC2O76061 302 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 FTH1P19P0C7X4 201 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 PEX2P28328 305 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 GUCY1A2P33402 732 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 TLE1Q04724 770 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 POLD3Q15054 466 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-207ENST00000495817 FAM214AQ32MH5 1076 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 KHDC1Q4VXA5 237 aaKnown RBP7.27□□□□□ -1.25
CCDC39-207ENST00000495817 CRIP3Q6Q6R5 217 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 GADL1Q6ZQY3 521 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 Q6ZRM9 215 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 PLBD2Q8NHP8 589 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 IFI44Q8TCB0 444 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 TMX3Q96JJ7 454 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 TNIP3Q96KP6 325 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 VPS11Q9H270 941 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 HDAC5Q9UQL6 1122 aa7.27□□□□□ -1.25
CCDC39-207ENST00000495817 MYBBP1AQ9BQG0 1328 aaKnown RBP7.27□□□□□ -1.25
CCDC39-207ENST00000495817 KLRG2A4D1S0 409 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-207ENST00000495817 LRRC14BA6NHZ5 514 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 ADCY6O43306 1168 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 PEX11BO96011 259 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 AMY1AP04745 511 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 TYRP14679 529 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 DDCP20711 480 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 TACR2P21452 398 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 FLT3LGP49771 235 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 SCNN1GP51170 649 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 ATP8B2P98198 1209 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 APBA1Q02410 837 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 FOXE3Q13461 319 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 SWSAP1Q6NVH7 229 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 TOGARAM2Q6ZUX3 1019 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 HEATR3Q7Z4Q2 680 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 MORC1Q86VD1 984 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 TRMT2AQ8IZ69 625 aaKnown RBP7.26□□□□□ -1.25
CCDC39-207ENST00000495817 SPICE1Q8N0Z3 855 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 OR52N2Q8NGI0 321 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 CACTINQ8WUQ7 758 aaKnown RBP7.26□□□□□ -1.25
CCDC39-207ENST00000495817 ZNF503Q96F45 646 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 CPPED1Q9BRF8 314 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-207ENST00000495817 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 SENP6Q9GZR1 1112 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-207ENST00000495817 TMEM140Q9NV12 185 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 PNPOQ9NVS9 261 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 PCDHGB6Q9Y5F9 930 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 PCDHA3Q9Y5H8 950 aa7.26□□□□□ -1.25
CCDC39-207ENST00000495817 CFAP69A5D8W1 941 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 H3BUI4 141 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 PHGDHO43175 533 aaKnown RBP7.25□□□□□ -1.25
CCDC39-207ENST00000495817 GPR32O75388 356 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 IL2RBP14784 551 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 RPL17P18621 184 aaKnown RBP7.25□□□□□ -1.25
CCDC39-207ENST00000495817 MALP21145 153 aa7.25□□□□□ -1.25
CCDC39-207ENST00000495817 TM4SF4P48230 202 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms