RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 KRT39Q6A163 491 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 TRAPPC11Q7Z392 1133 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 BEST2Q8NFU1 509 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 MRPL9Q9BYD2 267 aaKnown RBP21.05■□□□□ 0.96
ATG3-208ENST00000495756 DPP3Q9NY33 737 aa21.05■□□□□ 0.96
ATG3-208ENST00000495756 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.05■□□□□ 0.96
ATG3-208ENST00000495756 PES1O00541 588 aaKnown RBP21.04■□□□□ 0.96
ATG3-208ENST00000495756 BMP8BP34820 402 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 GUCY2FP51841 1108 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 HTRA4P83105 476 aaPredicted RBP21.04■□□□□ 0.96
ATG3-208ENST00000495756 RNASELQ05823 741 aaKnown RBP21.04■□□□□ 0.96
ATG3-208ENST00000495756 PAN2Q504Q3 1202 aaKnown RBP21.04■□□□□ 0.96
ATG3-208ENST00000495756 TDRD10Q5VZ19 366 aaKnown RBP21.04■□□□□ 0.96
ATG3-208ENST00000495756 LRRC43Q8N309 656 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 TMEM130Q8N3G9 435 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 C1orf127Q8N9H9 656 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 YME1L1Q96TA2 773 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 ZBED2Q9BTP6 218 aa21.04■□□□□ 0.96
ATG3-208ENST00000495756 A0A1B0GTH6 734 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 FSD2A1L4K1 749 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 LGALS16A8MUM7 142 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 PMM2O15305 246 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 N4BP1O75113 896 aaKnown RBP21.03■□□□□ 0.96
ATG3-208ENST00000495756 MYL7Q01449 175 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 DSC1Q08554 894 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 TUSC3Q13454 348 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 BIRC3Q13489 604 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 ZNF280BQ86YH2 543 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 CMTR2Q8IYT2 770 aaKnown RBP21.03■□□□□ 0.96
ATG3-208ENST00000495756 CXorf38Q8TB03 319 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
ATG3-208ENST00000495756 GOLGA2P5Q9HBQ8 144 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 ITGA11Q9UKX5 1188 aa21.03■□□□□ 0.96
ATG3-208ENST00000495756 GOLGA6L3A6NEY3 463 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 P4HA2O15460 535 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 B4GALT3O60512 393 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 DDHD2O94830 711 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 ITGB3P05106 788 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 FILIP1LQ4L180 1135 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 RAD9AQ99638 391 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 RTN4Q9NQC3 1192 aaKnown RBP21.02■□□□□ 0.96
ATG3-208ENST00000495756 SIX4Q9UIU6 781 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 INSL6Q9Y581 213 aa21.02■□□□□ 0.96
ATG3-208ENST00000495756 PHACTR2O75167 634 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 VNN1O95497 513 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 LRPAP1P30533 357 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 UBASH3AP57075 661 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 PLCB2Q00722 1185 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
ATG3-208ENST00000495756 SCARA3Q6AZY7 606 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 SARM1Q6SZW1 724 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 COLGALT2Q8IYK4 626 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 TAS1R2Q8TE23 839 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 FAM193BQ96PV7 902 aaPredicted RBP21.01■□□□□ 0.95
ATG3-208ENST00000495756 IFNKQ9P0W0 207 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 COQ4Q9Y3A0 265 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 LAMA3Q16787 3333 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 GTPBP10A4D1E9 387 aaKnown RBP21.01■□□□□ 0.95
ATG3-208ENST00000495756 CASTOR2A6NHX0 329 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 AP5Z1O43299 807 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 KRT19P08727 400 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 POLR2BP30876 1174 aaKnown RBP21.01■□□□□ 0.95
ATG3-208ENST00000495756 CETN1Q12798 172 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 NCOA4Q13772 614 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 NR1I3Q14994 352 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 FKBP15Q5T1M5 1219 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 C9orf57Q5W0N0 161 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 FBXL13Q8NEE6 735 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 UROC1Q96N76 676 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 NRDE2Q9H7Z3 1164 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 HCSTQ9UBK5 93 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 CACNG4Q9UBN1 327 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 DNAJB4Q9UDY4 337 aa21.01■□□□□ 0.95
ATG3-208ENST00000495756 ANO9A1A5B4 782 aa21■□□□□ 0.95
ATG3-208ENST00000495756 TLL1O43897 1013 aa21■□□□□ 0.95
ATG3-208ENST00000495756 CST3P01034 146 aaPredicted RBP21■□□□□ 0.95
ATG3-208ENST00000495756 HLA-DRAP01903 254 aa21■□□□□ 0.95
ATG3-208ENST00000495756 RPL9P32969 192 aaKnown RBP21■□□□□ 0.95
ATG3-208ENST00000495756 CLCNKBP51801 687 aa21■□□□□ 0.95
ATG3-208ENST00000495756 RBP5P82980 135 aa21■□□□□ 0.95
ATG3-208ENST00000495756 UBXN1Q04323 297 aa21■□□□□ 0.95
ATG3-208ENST00000495756 TRPC3Q13507 836 aa21■□□□□ 0.95
ATG3-208ENST00000495756 GSE1Q14687 1217 aa21■□□□□ 0.95
ATG3-208ENST00000495756 UPP1Q16831 310 aa21■□□□□ 0.95
ATG3-208ENST00000495756 EPC2Q52LR7 807 aa21■□□□□ 0.95
ATG3-208ENST00000495756 FAM109BQ6ICB4 259 aaPredicted RBP21■□□□□ 0.95
ATG3-208ENST00000495756 SEMA4DQ92854 862 aa21■□□□□ 0.95
ATG3-208ENST00000495756 DDX27Q96GQ7 796 aaKnown RBP21■□□□□ 0.95
ATG3-208ENST00000495756 PAAF1Q9BRP4 392 aa21■□□□□ 0.95
ATG3-208ENST00000495756 XPO4Q9C0E2 1151 aaKnown RBP21■□□□□ 0.95
ATG3-208ENST00000495756 CWH43Q9H720 699 aa21■□□□□ 0.95
ATG3-208ENST00000495756 AGAP1Q9UPQ3 857 aa21■□□□□ 0.95
ATG3-208ENST00000495756 PODXLO00592 558 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 PIRO00625 290 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 PPEF2O14830 753 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 TEX33O43247 280 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 ZC3H11AO75152 810 aaKnown RBP eCLIP20.99■□□□□ 0.95
ATG3-208ENST00000495756 PIK3CAP42336 1068 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 GBP6Q6ZN66 633 aa20.99■□□□□ 0.95
ATG3-208ENST00000495756 SP7Q8TDD2 431 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms