RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 MTAPQ13126 283 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 ME3Q16798 604 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 PRSS36Q5K4E3 855 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 TSSK4Q6SA08 328 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 ZNF687Q8N1G0 1237 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 C3orf58Q8NDZ4 430 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 GTF3C6Q969F1 213 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 IER2Q9BTL4 223 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 TRMT61BQ9BVS5 477 aaKnown RBP19.28■□□□□ 0.68
TMEM53-209ENST00000495630 BRD9Q9H8M2 597 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 TRPV5Q9NQA5 729 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 TOPORSQ9NS56 1045 aaPredicted RBP19.28■□□□□ 0.68
TMEM53-209ENST00000495630 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 NOTCH4Q99466 2003 aa19.28■□□□□ 0.68
TMEM53-209ENST00000495630 MIA3Q5JRA6 1907 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 H7C4K7 107 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 I3L4J1 428 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 SYN3O14994 580 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 CEBPBP17676 345 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 TGM1P22735 817 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 GRM5P41594 1212 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 MRPL58Q14197 206 aaKnown RBP19.27■□□□□ 0.68
TMEM53-209ENST00000495630 FAM78AQ5JUQ0 283 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 IRF7Q92985 503 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 CORO1BQ9BR76 489 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 KIFC3Q9BVG8 833 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 CCDC94Q9BW85 323 aaPredicted RBP19.27■□□□□ 0.68
TMEM53-209ENST00000495630 GOLGA2P5Q9HBQ8 144 aa19.27■□□□□ 0.68
TMEM53-209ENST00000495630 WDR27A2RRH5 827 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 FCARP24071 287 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 RPL9P32969 192 aaKnown RBP19.26■□□□□ 0.67
TMEM53-209ENST00000495630 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-209ENST00000495630 PPP2R5DQ14738 602 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 SAFBQ15424 915 aaKnown RBP eCLIP19.26■□□□□ 0.67
TMEM53-209ENST00000495630 CYP4A22Q5TCH4 519 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 TPGS2Q68CL5 300 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 CELF5Q8N6W0 485 aaKnown RBP19.26■□□□□ 0.67
TMEM53-209ENST00000495630 ASB16Q96NS5 453 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 RTKNQ9BST9 563 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 CHRDQ9H2X0 955 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 CYP4F11Q9HBI6 524 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 POLD4Q9HCU8 107 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 CDV3Q9UKY7 258 aaKnown RBP19.26■□□□□ 0.67
TMEM53-209ENST00000495630 MAFFQ9ULX9 164 aa19.26■□□□□ 0.67
TMEM53-209ENST00000495630 COL4A3Q01955 1670 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 OR52Z1P0C646 297 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 SOX4Q06945 474 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-209ENST00000495630 HAUS3Q68CZ6 603 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 PDZD4Q76G19 769 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-209ENST00000495630 MAP4K3Q8IVH8 894 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 TCEAL4Q96EI5 215 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 ACO2Q99798 780 aaKnown RBP19.25■□□□□ 0.67
TMEM53-209ENST00000495630 TMEM134Q9H6X4 195 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 ZNF334Q9HCZ1 680 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-209ENST00000495630 PTPRHQ9HD43 1115 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 GMEB2Q9UKD1 530 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 VWA8A3KMH1 1905 aa19.25■□□□□ 0.67
TMEM53-209ENST00000495630 PODXLO00592 558 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 JAK2O60674 1132 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 LARGE1O95461 756 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 SEC24AO95486 1093 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 TDGF1P13385 188 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 KCNE1P15382 129 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 PSMC3P17980 439 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 ARPP19P56211 112 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 GRM2Q14416 872 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 ZNF174Q15697 407 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 ELMOD1Q8N336 334 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 FAM3CQ92520 227 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 SMARCD2Q92925 531 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 ZNF512Q96ME7 567 aaPredicted RBP19.24■□□□□ 0.67
TMEM53-209ENST00000495630 CNTNAP3BQ96NU0 1288 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 ACAP3Q96P50 834 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 CNTNAP3Q9BZ76 1288 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 LMAN1LQ9HAT1 526 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 FBXL5Q9UKA1 691 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 RAB23Q9ULC3 237 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 USP18Q9UMW8 372 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 NDRG2Q9UN36 371 aaKnown RBP19.24■□□□□ 0.67
TMEM53-209ENST00000495630 INSL5Q9Y5Q6 135 aa19.24■□□□□ 0.67
TMEM53-209ENST00000495630 F5P12259 2224 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 CCT6AP40227 531 aaKnown RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 FOSBP53539 338 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 MLLT6P55198 1093 aaPredicted RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 ECM1Q16610 540 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 CEP120Q8N960 986 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 LEMD2Q8NC56 503 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 DEPDC1BQ8WUY9 529 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 ZSWIM3Q96MP5 696 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 ZMAT2Q96NC0 199 aaKnown RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 MRPL4Q9BYD3 311 aaKnown RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 CDT1Q9H211 546 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 TRPV4Q9HBA0 871 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 AFF4Q9UHB7 1163 aaKnown RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
TMEM53-209ENST00000495630 NUB1Q9Y5A7 615 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 PHLPP2Q6ZVD8 1323 aa19.23■□□□□ 0.67
TMEM53-209ENST00000495630 CCDC169A6NNP5 214 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms