RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TRPC3Q13507 836 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 PAPD7Q5XG87 772 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 KLHDC9Q8NEP7 349 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 MTMR12Q9C0I1 747 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 ASB7Q9H672 318 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 NOCTQ9UK39 431 aaKnown RBP12.35□□□□□ -0.43
HDLBP-245ENST00000494862 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
HDLBP-245ENST00000494862 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 TRPA1O75762 1119 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 PGK1P00558 417 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 GNRH1P01148 92 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 TMEM253P0C7T8 217 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CXCL8P10145 99 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 KRT5P13647 590 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 FGFR4P22455 802 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 EIF4BP23588 611 aaKnown RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 PDE6CP51160 858 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 GALCP54803 685 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 OSTNP61366 133 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 AMPD2Q01433 879 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CDR2Q01850 454 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 SLC10A6Q3KNW5 377 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 SPOPLQ6IQ16 392 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 NOP9Q86U38 636 aaKnown RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CD302Q8IX05 232 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 TMEM192Q8IY95 271 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 TAF4BQ92750 862 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 OSMRQ99650 979 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 SEPT11Q9NVA2 429 aaKnown RBP12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 GINS2Q9Y248 185 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 CAPN6Q9Y6Q1 641 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
HDLBP-245ENST00000494862 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 BUB1O43683 1085 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 HMGCRP04035 888 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 ATP1A1P05023 1023 aaKnown RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 GZMAP12544 262 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 ELNP15502 786 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CYP11B1P15538 503 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CST5P28325 142 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 HOXA11P31270 313 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 NAP1L1P55209 391 aaKnown RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 MYL6P60660 151 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 FMO1Q01740 532 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 SNX17Q15036 470 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 ZNF677Q86XU0 584 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 NT5DC4Q86YG4 428 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 UBR7Q8N806 425 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 DDX1Q92499 740 aaKnown RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CCDC94Q9BW85 323 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-245ENST00000494862 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 PLEKHA5Q9HAU0 1116 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 GTF2IRD1Q9UHL9 959 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 PCDHB4Q9Y5E5 795 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 NCANO14594 1321 aa12.33□□□□□ -0.44
HDLBP-245ENST00000494862 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 KAT6AQ92794 2004 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ENC1O14682 589 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 RTN2O75298 545 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 TADA3O75528 432 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 NPTXRO95502 500 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms