RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 RHOP08100 348 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 XRCC6P12956 609 aaKnown RBP eCLIP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 CEBPBP17676 345 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 CYP11B2P19099 503 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 FGFR3P22607 806 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 PRKCQQ04759 706 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ELAVL2Q12926 359 aaKnown RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 RAB33AQ14088 237 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 GRM2Q14416 872 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ANKRD1Q15327 319 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 FAM187BQ17R55 369 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 SLC5A9Q2M3M2 681 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 TSR1Q2NL82 804 aaKnown RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ATF7IP2Q5U623 682 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 TANGO2Q6ICL3 276 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 PDXDC1Q6P996 788 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 SUMF1Q8NBK3 374 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 C3orf58Q8NDZ4 430 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 NSUN7Q8NE18 718 aaKnown RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ERMNQ8TAM6 284 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ATRIPQ8WXE1 791 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 GTF3C6Q969F1 213 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 TCEAL4Q96EI5 215 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 NACC1Q96RE7 527 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 CORO1BQ9BR76 489 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 TUFT1Q9NNX1 390 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 LTB4R2Q9NPC1 389 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 HEBP1Q9NRV9 189 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 MTRRQ9UBK8 725 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 NDRG2Q9UN36 371 aaKnown RBP7.4□□□□□ -1.22
SEC23B-208ENST00000494645 ZMYM2Q9UBW7 1377 aa7.4□□□□□ -1.22
SEC23B-208ENST00000494645 DOCK8Q8NF50 2099 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 DOCK6Q96HP0 2047 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 TDRD15B5MCY1 1934 aaKnown RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 ARID2Q68CP9 1835 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 CCDC169A6NNP5 214 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 LRG1P02750 347 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 HARSP12081 509 aaKnown RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 HOXA9P31269 272 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 ELF1P32519 619 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 CCT6AP40227 531 aaKnown RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 NAMPTP43490 491 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 PFKPQ01813 784 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 SOX4Q06945 474 aaPredicted RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 PUM1Q14671 1186 aaKnown RBP eCLIP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 LPAL2Q16609 132 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 ECM1Q16610 540 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 UVSSAQ2YD98 709 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 DCAF4L1Q3SXM0 396 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 ZBTB41Q5SVQ8 909 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 CD300LGQ6UXG3 332 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 CEP120Q8N960 986 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 C18orf25Q96B23 403 aaPredicted RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 IFT74Q96LB3 600 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 PPP1R10Q96QC0 940 aaKnown RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 POLR3CQ9BUI4 534 aaPredicted RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 DDX23Q9BUQ8 820 aaKnown RBP7.39□□□□□ -1.23
SEC23B-208ENST00000494645 CYP4F11Q9HBI6 524 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 KCNH3Q9ULD8 1083 aa7.39□□□□□ -1.23
SEC23B-208ENST00000494645 SMIM28A0A1B0GU29 152 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 K7ERI5 159 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 PODXLO00592 558 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 NRG2O14511 850 aaPredicted RBP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 TRAPPC3O43617 180 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ECI2O75521 394 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 SEC24AO95486 1093 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 OR52Z1P0C646 297 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 MYL4P12829 197 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 GJA1P17302 382 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 PTPN2P17706 415 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 RPA1P27694 616 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 NEK4P51957 841 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 EFNA5P52803 228 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 YARSP54577 528 aaKnown RBP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ROR1Q01973 937 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 MTAPQ13126 283 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 PPP2R5AQ15172 486 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 SAFBQ15424 915 aaKnown RBP eCLIP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 UPP1Q16831 310 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 FAM78AQ5JUQ0 283 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ZNF852Q6ZMS4 543 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ANKS3Q6ZW76 656 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 GPIHBP1Q8IV16 184 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ZFRQ96KR1 1074 aaKnown RBP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ZSWIM3Q96MP5 696 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ZMAT2Q96NC0 199 aaKnown RBP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 BHMT2Q9H2M3 363 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 BRD9Q9H8M2 597 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 ZSCAN32Q9NX65 697 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 GDE1Q9NZC3 331 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 FBXO4Q9UKT5 387 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 USP18Q9UMW8 372 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 SMG5Q9UPR3 1016 aaKnown RBP7.38□□□□□ -1.23
SEC23B-208ENST00000494645 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
SEC23B-208ENST00000494645 BACE2Q9Y5Z0 518 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms