RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 KLHL23Q8NBE8 558 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 KCTD6Q8NC69 237 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 FNIP1Q8TF40 1166 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 RSAD2Q8WXG1 361 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ISL2Q96A47 359 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 NMD3Q96D46 503 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 NEIL1Q96FI4 390 aaPredicted RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 KLHDC7BQ96G42 594 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 TRIM47Q96LD4 638 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 TSGA13Q96PP4 275 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 GDF15Q99988 308 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 HGH1Q9BTY7 390 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ADI1Q9BV57 179 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 CARD10Q9BWT7 1032 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 JAM3Q9BX67 310 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 POFUT1Q9H488 388 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ACAD9Q9H845 621 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 RC3H2Q9HBD1 1191 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 SARS2Q9NP81 518 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 INCENPQ9NQS7 918 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 PIH1D1Q9NWS0 290 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 EIF2B4Q9UI10 523 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 SCAF8Q9UPN6 1271 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 PHF24Q9UPV7 400 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 PCDHB1Q9Y5F3 818 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 TCRBV5S4A2TA0A5A2 114 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 PLOD2O00469 737 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 ASNA1O43681 348 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 BEST1O76090 585 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 TYRP14679 529 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 RXRAP19793 462 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 MAPK4P31152 587 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 ADH7P40394 386 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 CTCFP49711 727 aaPredicted RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 NLRP5P59047 1200 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 RPS16P62249 146 aaKnown RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX13-210ENST00000494402 PPP2R5BQ15173 497 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 ARL6IP4Q66PJ3 421 aaKnown RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 PSAPL1Q6NUJ1 521 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 USP51Q70EK9 711 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 CPLX4Q7Z7G2 160 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 SLFN11Q7Z7L1 901 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 SLC9B2Q86UD5 537 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 NLGN4XQ8N0W4 816 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 TAGAPQ8N103 731 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 TMCO5AQ8N6Q1 288 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 SPC24Q8NBT2 197 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 SPATA18Q8TC71 538 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 DPF2Q92785 391 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 FAM120BQ96EK7 910 aaKnown RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 NOX5Q96PH1 765 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 PRPF18Q99633 342 aaKnown RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 MIPEPQ99797 713 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 RNPEPQ9H4A4 650 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 PRDM12Q9H4Q4 367 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 CYP4F12Q9HCS2 524 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 ERVK-5Q9HDB9 667 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 PI4KBQ9UBF8 816 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 CHORDC1Q9UHD1 332 aaPredicted RBP7.48□□□□□ -1.21
SNX13-210ENST00000494402 TMPRSS11EQ9UL52 423 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 CLCA2Q9UQC9 943 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 IRS2Q9Y4H2 1338 aa7.48□□□□□ -1.21
SNX13-210ENST00000494402 SENP3-EIF4A1A0A087X0R7 540 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 H7BY64 318 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 UBE2CO00762 179 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 C2CD2LO14523 706 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 KIAA0355O15063 1070 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 RNGTTO60942 597 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 RGS9O75916 674 aaPredicted RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 SLU7O95391 586 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 PGM3O95394 542 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 NDST3O95803 873 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 MT-ND5P03915 603 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 SDHAP31040 664 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 MCAMP43121 646 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 CTSKP43235 329 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PRKAA2P54646 552 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 SLC12A2P55011 1212 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 DLG4P78352 724 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PTSQ03393 145 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 ADCY2Q08462 1091 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 EPS8Q12929 822 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 STK4Q13043 487 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 FLYWCH1Q4VC44 716 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 EXOSC6Q5RKV6 272 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 RNF44Q7L0R7 432 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 SZRD1Q7Z422 152 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 ADSSL1Q8N142 457 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 SRBD1Q8N5C6 995 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 SH2D3CQ8N5H7 860 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 CCDC150Q8NCX0 1101 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PPP1R14CQ8TAE6 165 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms