RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 AIFM3Q96NN9 605 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PNKPQ96T60 521 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 PSMD1Q99460 953 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MAP3K14Q99558 947 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MRI1Q9BV20 369 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 KCNH6Q9H252 994 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MYH16Q9H6N6 1097 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 WDCPQ9H6R7 721 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 LDAHQ9H6V9 325 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CYP4F11Q9HBI6 524 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 NMRK2Q9NPI5 230 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 RLIMQ9NVW2 624 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 GOLGA6AQ9NYA3 693 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 CFAP97Q9P2B7 532 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 NOB1Q9ULX3 412 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 MTO1Q9Y2Z2 717 aaKnown RBP3.03□□□□□ -1.92
LMNB1-207ENST00000494185 FPGT-TNNI3KV9GXZ4 949 aa3.03□□□□□ -1.92
LMNB1-207ENST00000494185 XDHP47989 1333 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 LOC102724159A0A0B4J2E5 919 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 KLRG2A4D1S0 409 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 CXorf49A8MYA2 514 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 EIF3JO75822 258 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 SOAT2O75908 522 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 MAP4K4O95819 1239 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 FOSP01100 380 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 AMY1AP04745 511 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 TNFRSF1AP19438 455 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 ALDH1A3P47895 512 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 SCNN1GP51170 649 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 CTXN1P60606 82 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 ZXDAP98168 799 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 GUCY1B3Q02153 619 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 NHLH2Q02577 135 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF844Q08AG5 666 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 MTM1Q13496 603 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 PWP2Q15269 919 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 LRRC41Q15345 812 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 PGS1Q32NB8 556 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 PREPLQ4J6C6 727 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 PABPC1LQ4VXU2 614 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 DACT2Q5SW24 774 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 GORABQ5T7V8 394 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 NXNQ6DKJ4 435 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 CRIP3Q6Q6R5 217 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 Q6ZRM9 215 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 Q6ZSN1 163 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 SPRED1Q7Z699 444 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 XYLT1Q86Y38 959 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 RHOT2Q8IXI1 618 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 TCEAL8Q8IYN2 117 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 GRAMD1CQ8IYS0 662 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 MYO1HQ8N1T3 1032 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 LCORLQ8N3X6 602 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 PRR18Q8N4B5 295 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 C3orf20Q8ND61 904 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 SUPT20HQ8NEM7 779 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 BRIX1Q8TDN6 353 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 NSUN6Q8TEA1 469 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 NUP133Q8WUM0 1156 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 STON2Q8WXE9 905 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 RAB24Q969Q5 203 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 LENG9Q96B70 501 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 CLIP3Q96DZ5 547 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 MVB12AQ96EY5 273 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 CLPTM1LQ96KA5 538 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 LRGUKQ96M69 825 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 WWC2-AS2Q96NR7 200 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 KRTAP3-1Q9BYR8 98 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 GTPBP4Q9BZE4 634 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 NRDE2Q9H7Z3 1164 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 TBCCD1Q9NVR7 557 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 SIDT1Q9NXL6 827 aaKnown RBP3.02□□□□□ -1.93
LMNB1-207ENST00000494185 FZD1Q9UP38 647 aa3.02□□□□□ -1.93
LMNB1-207ENST00000494185 ATRNL1Q5VV63 1379 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 KIAA0391O15091 583 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MATN3O15232 486 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 AP1G1O43747 822 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 RPS6KA4O75676 772 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 FTLP02792 175 aaPredicted RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 FPR1P21462 350 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 DDX6P26196 483 aaKnown RBP eCLIP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 PCSK1P29120 753 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 BMPR1AP36894 532 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 INHBCP55103 352 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 TGFB2P61812 414 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ATP8B2P98198 1209 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 TARDBPQ13148 414 aaKnown RBP eCLIP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 TOB2Q14106 344 aaPredicted RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MLC1Q15049 377 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MINDY4Q4G0A6 757 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ATAT1Q5SQI0 421 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 SPTY2D1Q68D10 685 aaPredicted RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ANKS6Q68DC2 871 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 GPRIN1Q7Z2K8 1008 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 WDR75Q8IWA0 830 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ZGPATQ8N5A5 531 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 CAMKK1Q8N5S9 505 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 AMER2Q8N7J2 671 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MAGEB6Q8N7X4 407 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 IL17DQ8TAD2 202 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms