RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 CES5AQ6NT32 575 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 LNX1Q8TBB1 728 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-224ENST00000494132 POMGNT1Q8WZA1 660 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 UROC1Q96N76 676 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 POMKQ9H5K3 350 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 GDPD2Q9HCC8 539 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 OLFML3Q9NRN5 406 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 DZANK1Q9NVP4 752 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 SERTAD1Q9UHV2 236 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 CPSF3Q9UKF6 684 aaKnown RBP16.01■□□□□ 0.15
ATG4B-224ENST00000494132 DOCK8Q8NF50 2099 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 TGM5O43548 720 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 ADSSP30520 456 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 JADE1Q6IE81 842 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 SYCP3Q8IZU3 236 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 NOC3LQ8WTT2 800 aaKnown RBP16■□□□□ 0.15
ATG4B-224ENST00000494132 PIK3R5Q8WYR1 880 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 HVCN1Q96D96 273 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 SAAL1Q96ER3 474 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 DDX27Q96GQ7 796 aaKnown RBP16■□□□□ 0.15
ATG4B-224ENST00000494132 ACCSQ96QU6 501 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 POP1Q99575 1024 aaKnown RBP16■□□□□ 0.15
ATG4B-224ENST00000494132 CLSTN3Q9BQT9 956 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 PHF7Q9BWX1 381 aaPredicted RBP16■□□□□ 0.15
ATG4B-224ENST00000494132 CUEDC2Q9H467 287 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16■□□□□ 0.15
ATG4B-224ENST00000494132 AGO2Q9UKV8 859 aaKnown RBP16■□□□□ 0.15
ATG4B-224ENST00000494132 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
ATG4B-224ENST00000494132 PPEF2O14830 753 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 NFICP08651 508 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 PFKFB1P16118 471 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 SCP2P22307 547 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 FGFR3P22607 806 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 ABCD1P33897 745 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 MCM4P33991 863 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 ITIH3Q06033 890 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 ELAVL2Q12926 359 aaKnown RBP15.99■□□□□ 0.15
ATG4B-224ENST00000494132 CUL4BQ13620 913 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 RSPO2Q6UXX9 243 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-224ENST00000494132 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-224ENST00000494132 FNIP2Q9P278 1114 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 MUTYHQ9UIF7 546 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 KCNH3Q9ULD8 1083 aa15.99■□□□□ 0.15
ATG4B-224ENST00000494132 GOLGA8IPA6NC78 632 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 FAM86C2PA6NEL3 165 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 GOLGA8JA6NMD2 632 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 LOC730098B7Z3J9 87 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 AMPD3Q01432 767 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 SLFN12LQ6IEE8 588 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-224ENST00000494132 RNF135Q8IUD6 432 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 FAM84AQ96KN4 292 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 C7orf25Q9BPX7 421 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 CBWD1Q9BRT8 395 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 PCIF1Q9H4Z3 704 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 PLEKHA5Q9HAU0 1116 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 UBQLN1Q9UMX0 589 aaKnown RBP15.98■□□□□ 0.15
ATG4B-224ENST00000494132 EXOC7Q9UPT5 735 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 CDY1Q9Y6F8 540 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 STYXL1Q9Y6J8 313 aa15.98■□□□□ 0.15
ATG4B-224ENST00000494132 CCDC195A0A1B0GUA6 201 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 ACTN4O43707 911 aaKnown RBP15.97■□□□□ 0.15
ATG4B-224ENST00000494132 RPL9P32969 192 aaKnown RBP15.97■□□□□ 0.15
ATG4B-224ENST00000494132 OR1D2P34982 312 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 WNT7BP56706 349 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 ZBTB6Q15916 424 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 KYAT1Q16773 422 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 ATAT1Q5SQI0 421 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 VARS2Q5ST30 1063 aaKnown RBP15.97■□□□□ 0.15
ATG4B-224ENST00000494132 GPR149Q86SP6 731 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 CEP57L1Q8IYX8 460 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 KREMEN2Q8NCW0 462 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 RIPOR3Q96MK2 946 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 FAM213AQ9BRX8 229 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 MTRRQ9UBK8 725 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 NOTCH4Q99466 2003 aa15.97■□□□□ 0.15
ATG4B-224ENST00000494132 C2CD4DB7Z1M9 353 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 HOXD13P35453 343 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 MTHFRP42898 656 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 ARPP19P56211 112 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 CREMQ03060 361 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 ALCAMQ13740 583 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 TMEM132DQ14C87 1099 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 FAM26FQ5R3K3 315 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 LILRA6Q6PI73 481 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 NELFCDQ8IXH7 590 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 FBXW11Q9UKB1 542 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.15
ATG4B-224ENST00000494132 TIMM13Q9Y5L4 95 aaPredicted RBP15.96■□□□□ 0.15
ATG4B-224ENST00000494132 TECTAO75443 2155 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms