RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 KCNT2Q6UVM3 1135 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 COLGALT1Q8NBJ5 622 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 PLEKHO2Q8TD55 490 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
BRCA1-223ENST00000494123 TGS1Q96RS0 853 aaKnown RBP15.75■□□□□ 0.11
BRCA1-223ENST00000494123 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 MTUS1Q9ULD2 1270 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 FAN1Q9Y2M0 1017 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-223ENST00000494123 PTPRJQ12913 1337 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 IKBKBO14920 756 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 PBX3P40426 434 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 SLC11A1P49279 550 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 GUCY2FP51841 1108 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 ZNF445P59923 1031 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 TAP1Q03518 808 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 ENPEPQ07075 957 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 BIRC3Q13489 604 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 OR5B17Q8NGF7 314 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
BRCA1-223ENST00000494123 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 C17orf80Q9BSJ5 609 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 COLEC11Q9BWP8 271 aa15.74■□□□□ 0.11
BRCA1-223ENST00000494123 SAMSN1Q9NSI8 373 aaKnown RBP15.74■□□□□ 0.11
BRCA1-223ENST00000494123 NT5C1B-RDH14C9J2C7 533 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 PODXLO00592 558 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 NRP1O14786 923 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 PHACTR2O75167 634 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 ARHGEF15O94989 841 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 GALTP07902 379 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 KRT19P08727 400 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
BRCA1-223ENST00000494123 PPM1AP35813 382 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 MTIF2P46199 727 aaKnown RBP15.73■□□□□ 0.11
BRCA1-223ENST00000494123 CLCNKBP51801 687 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 MARSP56192 900 aaKnown RBP15.73■□□□□ 0.11
BRCA1-223ENST00000494123 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 FAM84AQ96KN4 292 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 FANCLQ9NW38 375 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 ITGA11Q9UKX5 1188 aa15.73■□□□□ 0.11
BRCA1-223ENST00000494123 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 CLSTN1O94985 981 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 ITGB3P05106 788 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 LRPAP1P30533 357 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 BMPR1AP36894 532 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 ERVK-21P61565 698 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TPM4P67936 248 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 CLDN10P78369 228 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 KCNJ12Q14500 433 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 UPP1Q16831 310 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TRAPPC11Q7Z392 1133 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 DHX40Q8IX18 779 aaKnown RBP15.72■□□□□ 0.11
BRCA1-223ENST00000494123 C1orf127Q8N9H9 656 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 FAM200AQ8TCP9 573 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TMEM169Q96HH4 297 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 PAAF1Q9BRP4 392 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 CBX8Q9HC52 389 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 SPG21Q9NZD8 308 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.72■□□□□ 0.11
BRCA1-223ENST00000494123 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TADA2AO75478 443 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 B3GAT3O94766 335 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 LINC00271P0C7V0 271 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
BRCA1-223ENST00000494123 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
BRCA1-223ENST00000494123 POLR2BP30876 1174 aaKnown RBP15.72■□□□□ 0.11
BRCA1-223ENST00000494123 GTF2H1P32780 548 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 GCLMP48507 274 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TRPC3Q13507 836 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 EPC2Q52LR7 807 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 C9orf57Q5W0N0 161 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 DCLRE1AQ6PJP8 1040 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 IRF2BP1Q8IU81 584 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TRIM59Q8IWR1 403 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 TMEM130Q8N3G9 435 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 ZNF516Q92618 1163 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 SLC35C1Q96A29 364 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 PLVAPQ9BX97 442 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 NUB1Q9Y5A7 615 aa15.72■□□□□ 0.11
BRCA1-223ENST00000494123 KIF4AO95239 1232 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 RB1P06400 928 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 TPM2P07951 284 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 PRKCSHP14314 528 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-223ENST00000494123 RBP5P82980 135 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 KRT17Q04695 432 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 PPP3CAQ08209 521 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 NCAPHQ15003 741 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 IQCB1Q15051 598 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 C1orf220Q5T0J3 134 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 CDKAL1Q5VV42 579 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms