RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SLC10A3P09131 477 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 CXCL8P10145 99 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MYBL2P10244 700 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MCF2P10911 925 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 MCM3P25205 808 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 GPC5P78333 572 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 SURF1Q15526 300 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 TAF1CQ15572 869 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 ACAD10Q6JQN1 1059 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF564Q8TBZ8 553 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 LMBR1Q8WVP7 490 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 FDXACB1Q9BRP7 624 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-208ENST00000494028 LRRC1Q9BTT6 524 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 NIF3L1Q9GZT8 377 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 FLRT1Q9NZU1 646 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 CTTNBP2NLQ9P2B4 639 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
CLCN6-208ENST00000494028 TRIP12Q14669 1992 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 H3BRB1 525 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 GPR25O00155 361 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CEP104O60308 925 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 ZEB2O60315 1214 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 PHACTR2O75167 634 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 IL18RAPO95256 599 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 NFICP08651 508 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM191BP0C7N4 346 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 UNGP13051 313 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 MARCKSL1P49006 195 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 MYL6P60660 151 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TNNC1P63316 161 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 NOMO3P69849 1222 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CENPCQ03188 943 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 MARCH8Q5T0T0 291 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CCDC70Q6NSX1 233 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 MON1BQ7L1V2 547 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CPNE8Q86YQ8 564 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 THNSL1Q8IYQ7 743 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 SMC1BQ8NDV3 1235 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 AENQ8WTP8 325 aaKnown RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 HDAC7Q8WUI4 952 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 USP6NLQ92738 828 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TCHPQ9BT92 498 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 CARD9Q9H257 536 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TUT1Q9H6E5 874 aaKnown RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 AVENQ9NQS1 362 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 STIM2Q9P246 746 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 DMGDHQ9UI17 866 aaKnown RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 L1RE1Q9UN81 338 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 GNEQ9Y223 722 aaKnown RBP11.41□□□□□ -0.58
CLCN6-208ENST00000494028 PCDHB4Q9Y5E5 795 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 PCDHB2Q9Y5E7 798 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 SCN10AQ9Y5Y9 1956 aa11.41□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM110-MUSTN1A8MSY1 372 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TSPAN1O60635 241 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 PPFIA4O75335 1185 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ZMYND10O75800 440 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TNNC2P02585 160 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF865P0CJ78 1059 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ARF4P18085 180 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 GNA15P30679 374 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ASPAP45381 313 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 BPIFB4P59827 614 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 MRPS25P82663 173 aaKnown RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 CBX1P83916 185 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 DGKDQ16760 1214 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM132AQ24JP5 1023 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF699Q32M78 642 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 GLE1Q53GS7 698 aaKnown RBP11.4□□□□□ -0.58
CLCN6-208ENST00000494028 NAA35Q5VZE5 725 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 IQSEC1Q6DN90 963 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TMEM270Q6UE05 265 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 SCARA5Q6ZMJ2 495 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ALG3Q92685 438 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 CD101Q93033 1021 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 APBA2Q99767 749 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ZSWIM1Q9BR11 485 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.4□□□□□ -0.584e-24■■□□□ 14.3
CLCN6-208ENST00000494028 SELENOOQ9BVL4 669 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 XYLT2Q9H1B5 865 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 ST7Q9NRC1 585 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 SLC5A4Q9NY91 659 aa11.4□□□□□ -0.58
CLCN6-208ENST00000494028 UVRAGQ9P2Y5 699 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms