RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 STOML1Q9UBI4 398 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 CCPG1Q9ULG6 757 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 ADAMTS5Q9UNA0 930 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 TRAF3IP3Q9Y228 551 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 COL4A3BPQ9Y5P4 624 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 PHIPQ8WWQ0 1821 aa6.59□□□□□ -1.35
CPSF7-213ENST00000494016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 EIF3CLB5ME19 914 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 IPO5O00410 1097 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 PDXKO00764 312 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF263O14978 683 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TGFB1I1O43294 461 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZBED4O75132 1171 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TADA3O75528 432 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 GNA14O95837 355 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 PLEKP08567 350 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ALAS1P13196 640 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 GAP43P17677 238 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ASPAP45381 313 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF131P52739 623 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 IGBP1P78318 339 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 SPP2Q13103 211 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ITGB3BPQ13352 177 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TNFAIP1Q13829 316 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ASTE1Q2TB18 679 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 DEFB115Q30KQ5 88 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF569Q5MCW4 686 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FKBP15Q5T1M5 1219 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ARTNQ5T4W7 220 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RSRC2Q7L4I2 434 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TRIM42Q8IWZ5 723 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 CCDC170Q8IYT3 715 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 CPXCR1Q8N123 301 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 SLC35F6Q8N357 371 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 PDCL2Q8N4E4 241 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 SMCR8Q8TEV9 937 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FBLIM1Q8WUP2 373 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZKSCAN4Q969J2 545 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 WNK4Q96J92 1243 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FANCD2OSQ96PS1 177 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FIZ1Q96SL8 496 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RIT2Q99578 217 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 EIF3CQ99613 913 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FEZ1Q99689 392 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZNF577Q9BSK1 485 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RSRP1Q9BUV0 290 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 YIPF2Q9BWQ6 316 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 STRA6Q9BX79 667 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 WDR11Q9BZH6 1224 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 IKZF4Q9H2S9 585 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ATXN3LQ9H3M9 355 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ACSS3Q9H6R3 686 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RPAP3Q9H6T3 665 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 MMRN2Q9H8L6 949 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 AGO4Q9HCK5 861 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 JADE2Q9NQC1 790 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 KCNH7Q9NS40 1196 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 MAP3K20Q9NYL2 800 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ARHGAP20Q9P2F6 1191 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TRIM10Q9UDY6 481 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 FZD1Q9UP38 647 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 TFR2Q9UP52 801 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 PLAGL2Q9UPG8 496 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RABGAP1Q9Y3P9 1069 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 RIPK3Q9Y572 518 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 MRFAP1Q9Y605 127 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 POLR2AP24928 1970 aaKnown RBP6.58□□□□□ -1.36
CPSF7-213ENST00000494016 DOCK1Q14185 1865 aa6.58□□□□□ -1.36
CPSF7-213ENST00000494016 ASTN1O14525 1302 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 FRMPD4Q14CM0 1322 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 HMX2A2RU54 273 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 EFCAB8A8MWE9 144 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 VWA5AO00534 786 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 CETN3O15182 167 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 CHMP2AO43633 222 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 KIF5CO60282 957 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 TLR2O60603 784 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 GAS7O60861 476 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 USP2O75604 605 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 FLOT1O75955 427 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 KIF20AO95235 890 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 LCA5LO95447 670 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 H2AFXP16104 143 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 VCAM1P19320 739 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 TRIM21P19474 475 aaKnown RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 TFE3P19532 575 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 FSTP19883 344 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 NMT1P30419 496 aaKnown RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 USP14P54578 494 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 BACE1P56817 501 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 KRT83P78385 493 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 APBA1Q02410 837 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 PTPN11Q06124 597 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-213ENST00000494016 MAPK7Q13164 816 aa6.57□□□□□ -1.36
CPSF7-213ENST00000494016 TUBB2AQ13885 445 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms