RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 CCDC51Q96ER9 411 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 LLPHQ9BRT6 129 aaKnown RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 NFKBIZQ9BYH8 718 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 SNTG2Q9NY99 539 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 PARP2Q9UGN5 583 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 LIMD1Q9UGP4 676 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ARIH1Q9Y4X5 557 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ARHGEF35A5YM69 484 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 CASTOR2A6NHX0 329 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 E9PMD0 336 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 GOLGA6L19H0YKK7 550 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 TRIM66O15016 1216 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ADAM12O43184 909 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 PRKCBP05771 671 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 KLRC2P26717 231 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 CCT6AP40227 531 aaKnown RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 DSG1Q02413 1049 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ITIH3Q06033 890 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 TYRO3Q06418 890 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 SIGLEC14Q08ET2 396 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 TCF15Q12870 199 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 MAPK7Q13164 816 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 PTGDRQ13258 359 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 BRD3Q15059 726 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 SAFBQ15424 915 aaKnown RBP eCLIP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ZKSCAN8Q15776 578 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 FAM187BQ17R55 369 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ARHGAP29Q52LW3 1261 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 RTP2Q5QGT7 225 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 FUT10Q6P4F1 479 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 SLC27A1Q6PCB7 646 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 PRSS55Q6UWB4 352 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 BMP8AQ7Z5Y6 402 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 GPR149Q86SP6 731 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 FMNL3Q8IVF7 1028 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 LRRC8AQ8IWT6 810 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ZNF707Q96C28 371 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 FAM193BQ96PV7 902 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 RPS6KC1Q96S38 1066 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 RUSC1Q9BVN2 902 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 BHMT2Q9H2M3 363 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ZSCAN16Q9H4T2 348 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-234ENST00000493923 RXFP1Q9HBX9 757 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 ARFGAP3Q9NP61 516 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 MAN1C1Q9NR34 630 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 CHST7Q9NS84 486 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 DZANK1Q9NVP4 752 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 KANSL3Q9P2N6 904 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 DNAI1Q9UI46 699 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 KIAA1024Q9UPX6 916 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 GIT1Q9Y2X7 761 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 FAM186AA6NE01 2351 aa8.91□□□□□ -0.98
HDAC6-234ENST00000493923 MYH11P35749 1972 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 CFAP54Q96N23 3096 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 GOLGA6L9A6NEM1 432 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 POLR3GO15318 223 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 RECQL4O94761 1208 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 KIF4AO95239 1232 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 SMC2O95347 1197 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 F13A1P00488 732 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 SRGAP2BP0DMP2 458 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 NEFHP12036 1026 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 SKILP12757 684 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 MTHFRP42898 656 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 LMAN1P49257 510 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 CES5AQ6NT32 575 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 RSPO2Q6UXX9 243 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 RBM43Q6ZSC3 357 aaKnown RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 TADA2BQ86TJ2 420 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 CABP7Q86V35 215 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 PALB2Q86YC2 1186 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 FBXL6Q8N531 539 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 IGSF22Q8N9C0 903 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 CNNM3Q8NE01 707 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 MCPH1Q8NEM0 835 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 RSAD2Q8WXG1 361 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 ZSCAN31Q96LW9 406 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 CCDC43Q96MW1 224 aaKnown RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 FAM210AQ96ND0 272 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 PNMA5Q96PV4 448 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 MYADMQ96S97 322 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 MRPL17Q9NRX2 175 aaKnown RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 FAM86C1Q9NVL1 165 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 PRMT7Q9NVM4 692 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-234ENST00000493923 LRWD1Q9UFC0 647 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 GDAQ9Y2T3 454 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 COL4A3Q01955 1670 aa8.9□□□□□ -0.98
HDAC6-234ENST00000493923 GVINP1Q7Z2Y8 2422 aa8.9□□□□□ -0.99
HDAC6-234ENST00000493923 TCHHQ07283 1943 aa8.9□□□□□ -0.99
HDAC6-234ENST00000493923 EP300Q09472 2414 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms