RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 NRDE2Q9H7Z3 1164 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 ANKEF1Q9NU02 776 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 WRAP73Q9P2S5 460 aaPredicted RBP8.37□□□□□ -1.07
RBM39-238ENST00000493853 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 TMEM221A6NGB7 291 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 MEIS3P2A8K0S8 358 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 M0R296 226 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 JAK2O60674 1132 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 CLASP2O75122 1294 aaKnown RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 POMCP01189 267 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 SSBP05455 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
RBM39-238ENST00000493853 CTSAP10619 480 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 KLRC2P26717 231 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 HOXA11P31270 313 aaPredicted RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 MTHFRP42898 656 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 SLC11A1P49279 550 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 PTENP60484 403 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ZXDAP98168 799 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 GUCY1B3Q02153 619 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 SPIRE1Q08AE8 756 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 HIF1AQ16665 826 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 RARS2Q5T160 578 aaKnown RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 KIAA1841Q6NSI8 718 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 SYCE2Q6PIF2 218 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ELMSAN1Q6PJG2 1045 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 AGMOQ6ZNB7 445 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 MRPL10Q7Z7H8 261 aaKnown RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 CABP7Q86V35 215 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ZNF280BQ86YH2 543 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 FAM184AQ8NB25 1140 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ERMNQ8TAM6 284 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 HSD17B14Q9BPX1 270 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 APOL6Q9BWW8 343 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ZBP1Q9H171 429 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 KCNH6Q9H252 994 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 ADAM7Q9H2U9 754 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 MINDY3Q9H8M7 445 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 MRPL17Q9NRX2 175 aaKnown RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 DZANK1Q9NVP4 752 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 DNAJB4Q9UDY4 337 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 DBR1Q9UK59 544 aaKnown RBP8.36□□□□□ -1.07
RBM39-238ENST00000493853 LIMCH1Q9UPQ0 1083 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 SSX2IPQ9Y2D8 614 aa8.36□□□□□ -1.07
RBM39-238ENST00000493853 RALGAPA2Q2PPJ7 1873 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 LRRIQ4A6NIV6 560 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 NRP1O14786 923 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 USO1O60763 962 aaKnown RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 DDHD2O94830 711 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 LYPLA2O95372 231 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 LARGE1O95461 756 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 URODP06132 367 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
RBM39-238ENST00000493853 NCLP19338 710 aaKnown RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 OR1G1P47890 313 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 POU5F1BQ06416 359 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 KCNC3Q14003 757 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 MAEAQ7L5Y9 396 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 TMEM173Q86WV6 379 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 CCDC83Q8IWF9 413 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 C12orf76Q8N812 135 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 TNFRSF25Q93038 417 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 CCDC51Q96ER9 411 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 ZSCAN31Q96LW9 406 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 TMEM175Q9BSA9 504 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 CSRNP2Q9H175 543 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 POLR3FQ9H1D9 316 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 PARP2Q9UGN5 583 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 PRG3Q9Y2Y8 225 aaPredicted RBP8.35□□□□□ -1.07
RBM39-238ENST00000493853 IPPQ9Y573 584 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 IRAK3Q9Y616 596 aa8.35□□□□□ -1.07
RBM39-238ENST00000493853 A0A087WWV3 80 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 ARL5CA6NH57 179 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 PIK3R2O00459 728 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 TSPAN1O60635 241 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 WEE2P0C1S8 567 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 EPCAMP16422 314 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 ARL2P36404 184 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 RBM25P49756 843 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 RARRES1P49788 294 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 HMGN5P82970 282 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 SIGLEC14Q08ET2 396 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 ZNF174Q15697 407 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 PTPN21Q16825 1174 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 UBXN11Q5T124 520 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 TMC5Q6UXY8 1006 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 CHSY3Q70JA7 882 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 BMP8AQ7Z5Y6 402 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 ZBTB8OSQ8IWT0 167 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 FBXL6Q8N531 539 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 MCPH1Q8NEM0 835 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 ACSF2Q96CM8 615 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms