RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FILIP1LQ4L180 1135 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 VWA3BQ502W6 1294 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 PAN2Q504Q3 1202 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 SPOUT1Q5T280 376 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 KRT39Q6A163 491 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 TRAPPC11Q7Z392 1133 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 RNF214Q8ND24 703 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
LSM2-214ENST00000493387 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 MTMR12Q9C0I1 747 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 HSD3B7Q9H2F3 369 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
LSM2-214ENST00000493387 ATICP31939 592 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 PNPLA4P41247 253 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 GCLMP48507 274 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 FMO5P49326 533 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
LSM2-214ENST00000493387 MXI1P50539 228 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 PPP3CAQ08209 521 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 NAB2Q15742 525 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 HSP90AA4PQ58FG1 418 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
LSM2-214ENST00000493387 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 TMCO2Q7Z6W1 182 aaPredicted RBP12.47□□□□□ -0.41
LSM2-214ENST00000493387 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 OR5B17Q8NGF7 314 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 C18orf25Q96B23 403 aaPredicted RBP12.47□□□□□ -0.41
LSM2-214ENST00000493387 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 SAMD11Q96NU1 681 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 CXCL16Q9H2A7 254 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 NDST4Q9H3R1 872 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
LSM2-214ENST00000493387 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 TMEM189-UBE2V1I3L0A0 370 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 PES1O00541 588 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 ZC3H11AO75152 810 aaKnown RBP eCLIP12.46□□□□□ -0.41
LSM2-214ENST00000493387 DDHD2O94830 711 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 SERPINC1P01008 464 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 GALTP07902 379 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 PPM1AP35813 382 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 SMAD3P84022 425 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 MYL7Q01449 175 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 LMBRD2Q68DH5 695 aaPredicted RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 ZNF280BQ86YH2 543 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 TAF4BQ92750 862 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 IMPG2Q9BZV3 1241 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 RBSNQ9H1K0 784 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 CWH43Q9H720 699 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 TAB2Q9NYJ8 693 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 STK39Q9UEW8 545 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 TUBGCP4Q9UGJ1 667 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 PCDHB12Q9Y5F1 795 aa12.46□□□□□ -0.41
LSM2-214ENST00000493387 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
LSM2-214ENST00000493387 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 TRIP11Q15643 1979 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 PTPRJQ12913 1337 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 FNDC1Q4ZHG4 1894 aaPredicted RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 CASTOR2A6NHX0 329 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 LGALS16A8MUM7 142 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 PODXLO00592 558 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 PIRO00625 290 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 STAU1O95793 577 aaKnown RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 ITGB3P05106 788 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 TPM3P06753 285 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 KRT19P08727 400 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 ATP1A3P13637 1013 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 PIK3CAP42336 1068 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 OR1G1P47890 313 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 RABGGTBP53611 331 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 BCAR1P56945 870 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 FANCCQ00597 558 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 SOX4Q06945 474 aaPredicted RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 ELAVL2Q12926 359 aaKnown RBP12.45□□□□□ -0.42
LSM2-214ENST00000493387 NCOA4Q13772 614 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 UPP1Q16831 310 aa12.45□□□□□ -0.42
LSM2-214ENST00000493387 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms