RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 MCM3P25205 808 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 WEE1P30291 646 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 JAM2P57087 298 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 TRADDQ15628 312 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 MEI1Q5TIA1 1274 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 NAIF1Q69YI7 327 aaPredicted RBP7.55□□□□□ -1.2
HERC4-211ENST00000492996 DAAM2Q86T65 1068 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 NLRX1Q86UT6 975 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 PAWRQ96IZ0 340 aaKnown RBP7.55□□□□□ -1.2
HERC4-211ENST00000492996 ACCSQ96QU6 501 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 POP1Q99575 1024 aaKnown RBP7.55□□□□□ -1.2
HERC4-211ENST00000492996 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 AP1M1Q9BXS5 423 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 TBC1D22BQ9NU19 505 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 TAS2R14Q9NYV8 317 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 KCND2Q9NZV8 630 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 GABBR1Q9UBS5 961 aa7.55□□□□□ -1.2
HERC4-211ENST00000492996 TTC36A6NLP5 189 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PPP1R37O75864 691 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 GLI1P08151 1106 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PLS3P13797 630 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ACTN2P35609 894 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 VAMP7P51809 220 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 GUCY2DQ02846 1103 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 CTC1Q2NKJ3 1217 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 MAMSTRQ6ZN01 415 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PLPPR4Q7Z2D5 763 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PEX26Q7Z412 305 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 CBWD2Q8IUF1 395 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ARHGEF19Q8IW93 802 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 NEK9Q8TD19 979 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 CEP170P1Q96L14 293 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 TSPAN18Q96SJ8 248 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 STK33Q9BYT3 514 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 EPB41L5Q9HCM4 733 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 STIM2Q9P246 746 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ANKRD63C9JTQ0 380 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 TLL1O43897 1013 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 HEXIM1O94992 359 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 KIF4AO95239 1232 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 TNFAIP3P21580 790 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 GGCXP38435 758 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PRKCIP41743 596 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 CARSP49589 748 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 PSMC5P62195 406 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PRPF4BQ13523 1007 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 NAA35Q5VZE5 725 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 SWSAP1Q6NVH7 229 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ANO5Q75V66 913 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ADAT2Q7Z6V5 191 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 SERINC5Q86VE9 423 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 DEFB118Q96PH6 123 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ACBD3Q9H3P7 528 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 GTPBP10A4D1E9 387 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 ZNF862O60290 1169 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 GUCY2FP51841 1108 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 MTIF3Q9H2K0 278 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 A1CFQ9NQ94 594 aaKnown RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 TOPORSQ9NS56 1045 aaPredicted RBP7.54□□□□□ -1.2
HERC4-211ENST00000492996 NFU1Q9UMS0 254 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 IGSF9BQ9UPX0 1349 aa7.54□□□□□ -1.2
HERC4-211ENST00000492996 DENND3A2RUS2 1198 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 RNF40O75150 1001 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 ADRB2P07550 413 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 RDXP35241 583 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 NPTX2P47972 431 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 GSCP56915 257 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 METTL13Q8N6R0 699 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 DIS3LQ8TF46 1054 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 BSNDQ8WZ55 320 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 ARHGEF26Q96DR7 871 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 PAIP2Q9BPZ3 127 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 IER2Q9BTL4 223 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 STRA6Q9BX79 667 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 TTYH1Q9H313 450 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 TMEM206Q9H813 350 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 XPNPEP3Q9NQH7 507 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 CPSF2Q9P2I0 782 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 DBR1Q9UK59 544 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 HELZP42694 1942 aaKnown RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 TMEM110-MUSTN1A8MSY1 372 aa7.53□□□□□ -1.2
HERC4-211ENST00000492996 BUB1BO60566 1050 aaPredicted RBP7.53□□□□□ -1.2
HERC4-211ENST00000492996 DLATP10515 647 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms