RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SUCLG2Q96I99 432 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CTAGE1Q96RT6 745 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 AGXT2Q9BYV1 514 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 KRT23Q9C075 422 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 UNC93B1Q9H1C4 597 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 DENND2DQ9H6A0 471 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 DCTPP1Q9H773 170 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 RPRD1BQ9NQG5 326 aaKnown RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 KRT84Q9NSB2 600 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 UBA2Q9UBT2 640 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 IL19Q9UHD0 177 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CPSF3Q9UKF6 684 aaKnown RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM5Q9Y2B1 443 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PCDHGB2Q9Y5G2 931 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TNPO3Q9Y5L0 923 aaKnown RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ATP8B3O60423 1300 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 A6NHS1 94 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 NUDT19A8MXV4 375 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 H0YIV9 168 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 STX16-NPEPL1H3BU86 382 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TRAF5O00463 557 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 BACH1O14867 736 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 KPNA5O15131 536 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 SULT1B1O43704 296 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 SYNCRIPO60506 623 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PEX11AO75192 247 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 RTN3O95197 1032 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 OR5F1O95221 314 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ABCB1P08183 1280 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 IFNAR1P17181 557 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 IL10P22301 178 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ACSL1P33121 698 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 DHPSP49366 369 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PSMD7P51665 324 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 CASP5P51878 434 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 MAPK10P53779 464 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 CDK17Q00537 523 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 RNASELQ05823 741 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 FOXO1Q12778 655 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TRAP1Q12931 704 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 KLF1Q13351 362 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 SURF1Q15526 300 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 CCDC85BQ15834 202 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 GPR162Q16538 588 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 DPYSL2Q16555 572 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 HADHQ16836 314 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 XKR3Q5GH77 459 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 FAM209BQ5JX69 171 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 YOD1Q5VVQ6 348 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 IQSEC1Q6DN90 963 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 THOC7Q6I9Y2 204 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 OGFOD3Q6PK18 319 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TXNDC11Q6PKC3 985 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ISLR2Q6UXK2 745 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 SLFN11Q7Z7L1 901 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 FAM160B2Q86V87 743 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 SLC22A9Q8IVM8 553 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 CNTROBQ8N137 903 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PLD6Q8N2A8 252 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 C10orf53Q8N6V4 93 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF527Q8NB42 609 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 BCL7CQ8WUZ0 217 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 METTL21AQ8WXB1 218 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 LPIN2Q92539 896 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 EZH1Q92800 747 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ZUFSPQ96AP4 578 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 MIEF2Q96C03 454 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 LTV1Q96GA3 475 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ART5Q96L15 291 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ADAD1Q96M93 576 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PRICKLE1Q96MT3 831 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 FERD3LQ96RJ6 166 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 RUFY1Q96T51 708 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 LLPHQ9BRT6 129 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TBCDQ9BTW9 1192 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 BRIP1Q9BX63 1249 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 MRPL4Q9BYD3 311 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 REXO4Q9GZR2 422 aaKnown RBP4.52□□□□□ -1.69
BRCA1-220ENST00000492859 XKR8Q9H6D3 395 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TRIM39Q9HCM9 518 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PREBQ9HCU5 417 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 EVA1BQ9NVM1 165 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 EHD3Q9NZN3 535 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 EMC3Q9P0I2 261 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 PSME2Q9UL46 239 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 ATP6V1DQ9Y5K8 247 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 TLL2Q9Y6L7 1015 aa4.52□□□□□ -1.69
BRCA1-220ENST00000492859 KIAA1217Q5T5P2 1943 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 CCDC78A2IDD5 438 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 LCHNA4D1U4 455 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 TRIM43BA6NCK2 446 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 OR6C74A6NCV1 312 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NCF1BA6NI72 391 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-220ENST00000492859 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
BRCA1-220ENST00000492859 NCF1CA8MVU1 366 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms