RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PAWRQ96IZ0 340 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 RPL10LQ96L21 214 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 PDCD2LQ9BRP1 358 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ADI1Q9BV57 179 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 SPATA5L1Q9BVQ7 753 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 BCO1Q9HAY6 547 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 OBP2AQ9NY56 170 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 GPRC5DQ9NZD1 345 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 RCAN3Q9UKA8 241 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 PCDHA13Q9Y5I0 950 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 UBE2QL1A1L167 161 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 DAPK3O43293 454 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 AP1G1O43747 822 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 STC2O76061 302 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 JUNP05412 331 aaKnown RBP3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 MYBP10242 640 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 GYPEP15421 78 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATF3P18847 181 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 FPR1P21462 350 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 PCSK1P29120 753 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 CASRP41180 1078 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 CLK3P49761 638 aaKnown RBP3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 RABGGTBP53611 331 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 TBX4P57082 545 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 GRM3Q14832 879 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 PRAMEF14Q5SWL7 426 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 KRT40Q6A162 431 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 SP5Q6BEB4 398 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 OVCH2Q7RTZ1 564 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 ELOA2Q8IYF1 753 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 LCORLQ8N3X6 602 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 FBXO18Q8NFZ0 1043 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 OR7D4Q8NG98 312 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 PPP1R35Q8TAP8 253 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 MVB12AQ96EY5 273 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 MRGPRX4Q96LA9 322 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 ACO2Q99798 780 aaKnown RBP3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 LRFN3Q9BTN0 628 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 KCNH6Q9H252 994 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 NMRK2Q9NPI5 230 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 GABBR1Q9UBS5 961 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 SORCS3Q9UPU3 1222 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 HS3ST4Q9Y661 456 aa3.78□□□□□ -1.8
HMGB1P30-201ENST00000492455 ZMYM3Q14202 1370 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 MYADML2A6NDP7 307 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 LRRC14BA6NHZ5 514 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 FAM171A2A8MVW0 826 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 PHF2O75151 1096 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 OFD1O75665 1012 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 ALDH2P05091 517 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 HSPA6P17066 643 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 ECHS1P30084 290 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 CRHR1P34998 444 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 GNALP38405 381 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 GBX1Q14549 363 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 MINDY4Q4G0A6 757 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 HSP90AB2PQ58FF8 381 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 MFSD14BQ5SR56 506 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 CCDC181Q5TID7 509 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 HTR3DQ70Z44 454 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 COL23A1Q86Y22 540 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 CMTM4Q8IZR5 234 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 PQLC1Q8N2U9 271 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 DCBLD1Q8N8Z6 715 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZBTB34Q8NCN2 500 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 IFI44Q8TCB0 444 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 CAVIN3Q969G5 261 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 HDAC10Q969S8 669 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 TIFAQ96CG3 184 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 CEP95Q96GE4 821 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 LDAHQ9H6V9 325 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 IL23AQ9NPF7 189 aa3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 TESQ9UGI8 421 aaKnown RBP3.77□□□□□ -1.81
HMGB1P30-201ENST00000492455 H3BML4 177 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 SGTAO43765 313 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 ENDOD1O94919 500 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 SCAF4O95104 1147 aaKnown RBP3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 ONECUT2O95948 504 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 ALOX15P16050 662 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 GNAT2P19087 354 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MAP2K6P52564 334 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 CDC42EP1Q00587 391 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 DUSP2Q05923 314 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MAPK7Q13164 816 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MTM1Q13496 603 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 FAM214AQ32MH5 1076 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 PGS1Q32NB8 556 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 GFOD2Q3B7J2 385 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 Q6YL49 198 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MIGA2Q7L4E1 593 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZNF572Q7Z3I7 529 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 RHOT1Q8IXI2 618 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 GRAMD1CQ8IYS0 662 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 PLBD2Q8NHP8 589 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MDM1Q8TC05 714 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 MAP3K14Q99558 947 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 C7orf25Q9BPX7 421 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 RNF7Q9UBF6 113 aa3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 SAP30BPQ9UHR5 308 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms