RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 RPF1Q9H9Y2 349 aaKnown RBP26.88■■□□□ 1.89
UPF3A-209ENST00000492270 PLEKHA5Q9HAU0 1116 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 CPSF3Q9UKF6 684 aaKnown RBP26.88■■□□□ 1.89
UPF3A-209ENST00000492270 DOCK6Q96HP0 2047 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 TRIOO75962 3097 aa26.88■■□□□ 1.89
UPF3A-209ENST00000492270 POLR2DO15514 142 aaKnown RBP26.87■■□□□ 1.89
UPF3A-209ENST00000492270 ADAM12O43184 909 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 MTHFRP42898 656 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 KYAT1Q16773 422 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 L1TD1Q5T7N2 865 aaKnown RBP26.87■■□□□ 1.89
UPF3A-209ENST00000492270 ADALQ6DHV7 355 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 IQUBQ8NA54 791 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 HPS3Q969F9 1004 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 RIPOR3Q96MK2 946 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 MUTYHQ9UIF7 546 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 STYXL1Q9Y6J8 313 aa26.87■■□□□ 1.89
UPF3A-209ENST00000492270 RFPL2O75678 378 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 ADSSP30520 456 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 ACOT2P49753 483 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 GUCY2FP51841 1108 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 LILRA6Q6PI73 481 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 GPR149Q86SP6 731 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 CCDC65Q8IXS2 484 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 GLIS3Q8NEA6 775 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 FAM212AQ96EL1 285 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 NECTIN4Q96NY8 510 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 TSHZ2Q9NRE2 1034 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 AGO2Q9UKV8 859 aaKnown RBP26.86■■□□□ 1.89
UPF3A-209ENST00000492270 MYO10Q9HD67 2058 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 TSC2P49815 1807 aa26.86■■□□□ 1.89
UPF3A-209ENST00000492270 SCN1AP35498 2009 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 FAM86C2PA6NEL3 165 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 DCXO43602 365 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 CASP1P29466 404 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 RPL9P32969 192 aaKnown RBP26.85■■□□□ 1.89
UPF3A-209ENST00000492270 ASIC1P78348 528 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 ZBTB6Q15916 424 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 ATAT1Q5SQI0 421 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 SLFN12LQ6IEE8 588 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 RSPO2Q6UXX9 243 aaPredicted RBP26.85■■□□□ 1.89
UPF3A-209ENST00000492270 LEO1Q8WVC0 666 aaPredicted RBP26.85■■□□□ 1.89
UPF3A-209ENST00000492270 ACCSQ96QU6 501 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 C11orf16Q9NQ32 467 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 FAM13BQ9NYF5 915 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 MTRRQ9UBK8 725 aa26.85■■□□□ 1.89
UPF3A-209ENST00000492270 TRAPPC3O43617 180 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 PRPF6O94906 941 aaKnown RBP26.84■■□□□ 1.89
UPF3A-209ENST00000492270 ADRB2P07550 413 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 JADE1Q6IE81 842 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 KREMEN2Q8NCW0 462 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 ZSWIM2Q8NEG5 633 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 POMGNT1Q8WZA1 660 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 C1QTNF1Q9BXJ1 281 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 LRRC27Q9C0I9 530 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 UBQLN1Q9UMX0 589 aaKnown RBP26.84■■□□□ 1.89
UPF3A-209ENST00000492270 NUB1Q9Y5A7 615 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 PCDHB13Q9Y5F0 798 aa26.84■■□□□ 1.89
UPF3A-209ENST00000492270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.83■■□□□ 1.89
UPF3A-209ENST00000492270 CCDC195A0A1B0GUA6 201 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 NFICP08651 508 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 KRT85P78386 507 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 PDXDC1Q6P996 788 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 CRELD2Q6UXH1 353 aaPredicted RBP26.83■■□□□ 1.89
UPF3A-209ENST00000492270 SPATA32Q96LK8 384 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 FBXW11Q9UKB1 542 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 EXOC7Q9UPT5 735 aa26.83■■□□□ 1.89
UPF3A-209ENST00000492270 C2CD4DB7Z1M9 353 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 ALADP13716 330 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 LRPAP1P30533 357 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 MCM4P33991 863 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 OR1D2P34982 312 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 BECN1Q14457 450 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 C15orf39Q6ZRI6 1047 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 GRAMD1CQ8IYS0 662 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 CMASQ8NFW8 434 aaPredicted RBP26.82■■□□□ 1.88
UPF3A-209ENST00000492270 HDAC7Q8WUI4 952 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 C7orf25Q9BPX7 421 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 BLZF1Q9H2G9 400 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 PLEKHA4Q9H4M7 779 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 KCNH3Q9ULD8 1083 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 CDY1Q9Y6F8 540 aa26.82■■□□□ 1.88
UPF3A-209ENST00000492270 DOCK8Q8NF50 2099 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 PPEF2O14830 753 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 C1RP00736 705 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 CYP3A5P20815 502 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 AFMP43652 599 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 AMPD3Q01432 767 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 ALCAMQ13740 583 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 VARS2Q5ST30 1063 aaKnown RBP26.81■■□□□ 1.88
UPF3A-209ENST00000492270 CNNM4Q6P4Q7 775 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 ELMSAN1Q6PJG2 1045 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 SYCP3Q8IZU3 236 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 ZNF707Q96C28 371 aaPredicted RBP26.81■■□□□ 1.88
UPF3A-209ENST00000492270 SAAL1Q96ER3 474 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 SUSD3Q96L08 255 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 MAGEF1Q9HAY2 307 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 DPP7Q9UHL4 492 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 SERTAD1Q9UHV2 236 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 NR2E1Q9Y466 385 aa26.81■■□□□ 1.88
UPF3A-209ENST00000492270 SPATA1Q5VX52 437 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms