RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 BCL7CQ8WUZ0 217 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-219ENST00000491747 POF1BQ8WVV4 589 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 KCNN1Q92952 543 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 MRPL9Q9BYD2 267 aaKnown RBP10.2□□□□□ -0.78
BRCA1-219ENST00000491747 TBC1D7Q9P0N9 293 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 GIT1Q9Y2X7 761 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 PCDHB12Q9Y5F1 795 aa10.2□□□□□ -0.78
BRCA1-219ENST00000491747 FRMD3A2A2Y4 597 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 MAP2K7O14733 419 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 MEFVO15553 781 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ZC3H11AO75152 810 aaKnown RBP eCLIP10.19□□□□□ -0.78
BRCA1-219ENST00000491747 SLC11A1P49279 550 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ZSCAN26Q16670 478 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 FAM178BQ8IXR5 827 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 THNSL1Q8IYQ7 743 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 GRAMD1CQ8IYS0 662 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 SLC39A11Q8N1S5 342 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 IQUBQ8NA54 791 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ZNF558Q96NG5 402 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 STRA6Q9BX79 667 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 UBN1Q9NPG3 1134 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 AAASQ9NRG9 546 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 GDAQ9Y2T3 454 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 MYO7AQ13402 2215 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 XIRP2A4UGR9 3374 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 CTAGE9A4FU28 777 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 PTGESO14684 152 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 RECQL4O94761 1208 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 TUBBP07437 444 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 GALTP07902 379 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 IDEP14735 1019 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 CASP5P51878 434 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ERVFC1P60507 584 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 OSTNP61366 133 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 GTF2BQ00403 316 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 RNASELQ05823 741 aaKnown RBP10.19□□□□□ -0.78
BRCA1-219ENST00000491747 KCNA1Q09470 495 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 STRN3Q13033 797 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 MTF1Q14872 753 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 SEZ6Q53EL9 994 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 SLC39A4Q6P5W5 647 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ZNF720Q7Z2F6 126 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 HDXQ7Z353 690 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 URGCPQ8TCY9 931 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 HPS3Q969F9 1004 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 MED15Q96RN5 788 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ADPGKQ9BRR6 497 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 TRIM9Q9C026 710 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 PANK4Q9NVE7 773 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 CACNG4Q9UBN1 327 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ADAM21Q9UKJ8 722 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 ANK1P16157 1881 aa10.19□□□□□ -0.78
BRCA1-219ENST00000491747 TISP43B9A030 160 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ANKRD63C9JTQ0 380 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 F8W810 466 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 MFAP3LO75121 409 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 PPP1R37O75864 691 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 PLCB3Q01970 1234 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 DSC1Q08554 894 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 DCAF4L1Q3SXM0 396 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ZNF568Q3ZCX4 644 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 MPZL3Q6UWV2 235 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 RAD9BQ6WBX8 426 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 APTXQ7Z2E3 356 aaKnown RBP10.18□□□□□ -0.78
BRCA1-219ENST00000491747 COLGALT2Q8IYK4 626 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 MSANTD4Q8NCY6 345 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 GLIS3Q8NEA6 775 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 GOLGA5Q8TBA6 731 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 GSDMAQ96QA5 445 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-219ENST00000491747 BLZF1Q9H2G9 400 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 CUEDC2Q9H467 287 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 SPG21Q9NZD8 308 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 RAB21Q9UL25 225 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 SPTBN5Q9NRC6 3674 aaKnown RBP10.18□□□□□ -0.78
BRCA1-219ENST00000491747 MYBP10242 640 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 HARSP12081 509 aaKnown RBP10.18□□□□□ -0.78
BRCA1-219ENST00000491747 GRM5P41594 1212 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 AFMP43652 599 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 NAB2Q15742 525 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 TCEAL5Q5H9L2 206 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ZNF569Q5MCW4 686 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ZPBP2Q6X784 338 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ADGRD2Q7Z7M1 963 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 C7orf25Q9BPX7 421 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 VN1R3Q9BXE9 311 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 LMAN2LQ9H0V9 348 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ST6GALNAC4Q9H4F1 302 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 KANSL3Q9P2N6 904 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ANKFY1Q9P2R3 1169 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 MYO1AQ9UBC5 1043 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 ITIH6Q6UXX5 1313 aa10.18□□□□□ -0.78
BRCA1-219ENST00000491747 H0YCG3 227 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 NRP1O14786 923 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TEX33O43247 280 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TOM1L1O75674 476 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PIGRP01833 764 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms