RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	SLFN11	Q7Z7L1	901 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	NOP9	Q86U38	636 aa	Known RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	LRRC6	Q86X45	466 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	RHPN2	Q8IUC4	686 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	XXYLT1	Q8NBI6	393 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	CCDC110	Q8TBZ0	833 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	ART4	Q93070	314 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	ZWILCH	Q9H900	591 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	LRRC4B	Q9NT99	713 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SPEF2	Q9C093	1822 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	TGFB1I1	O43294	461 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	ATP6V1C1	P21283	382 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SERPINB3	P29508	390 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	ATXN3	P54252	364 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	DSTYK	Q6XUX3	929 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	CENPU	Q71F23	418 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	BBOF1	Q8ND07	529 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SMC1B	Q8NDV3	1235 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	CEP70	Q8NHQ1	597 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	RAB3IL1	Q8TBN0	382 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SLC26A7	Q8TE54	656 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	SNRNP27	Q8WVK2	155 aa	Known RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	NMD3	Q96D46	503 aa	Known RBP	10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	CFAP36	Q96G28	342 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	NACC1	Q96RE7	527 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	OSBPL8	Q9BZF1	889 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	GLT8D2	Q9H1C3	349 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	EPB41L4B	Q9H329	900 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	C1orf112	Q9NSG2	853 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	PCDHB4	Q9Y5E5	795 aa		10.41	□□□□□ -0.74
ERCC3-208	ENST00000491292	LMNA	P02545	664 aa	Known RBP	10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	TPBGL	P0DKB5	382 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	PTPN4	P29074	926 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	PSMD6	Q15008	389 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	PADI6	Q6TGC4	694 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	IZUMO2	Q6UXV1	221 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	SPATA24	Q86W54	205 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	C8orf37	Q96NL8	207 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	TSSK1B	Q9BXA7	367 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	ANKFY1	Q9P2R3	1169 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292		F5H423	210 aa	Predicted RBP	10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	GGPS1	O95749	300 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	CD19	P15391	556 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	PSMC4	P43686	418 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	ATP13A4	Q4VNC1	1196 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	RASSF3	Q86WH2	238 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	PCDHB18P	Q96TA0	734 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	NDE1	Q9NXR1	346 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	USP20	Q9Y2K6	914 aa		10.4	□□□□□ -0.74
ERCC3-208	ENST00000491292	TMEM150B	A6NC51	233 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	LPXN	O60711	386 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	PEX11A	O75192	247 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	TOM1L1	O75674	476 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	SP100	P23497	879 aa	Predicted RBP	10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	SSTR1	P30872	391 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	MAN1A1	P33908	653 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	PPP3CA	Q08209	521 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	MAP7	Q14244	749 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	FAM111A	Q96PZ2	611 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	ACCS	Q96QU6	501 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	LXN	Q9BS40	222 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	GPRC5C	Q9NQ84	441 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	PCYOX1	Q9UHG3	505 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292	MAD1L1	Q9Y6D9	718 aa		10.4	□□□□□ -0.75
ERCC3-208	ENST00000491292		A0A1B0GVG6	124 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	HNRNPDL	O14979	420 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	TLR3	O15455	904 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	AHCYL1	O43865	530 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	STK10	O94804	968 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	CETP	P11597	493 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	PHB	P35232	272 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	WDR4	P57081	412 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	SLC1A5	Q15758	541 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	MIPOL1	Q8TD10	442 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	NSL1	Q96IY1	281 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	ANGPTL2	Q9UKU9	493 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	PYGL	P06737	847 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	ANXA13	P27216	316 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	GPSM2	P81274	684 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	FASTKD3	Q14CZ7	662 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	LRRC74B	Q6ZQY2	392 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	C3orf62	Q6ZUJ4	267 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	CBWD2	Q8IUF1	395 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	ZDHHC14	Q8IZN3	488 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	PPM1N	Q8N819	430 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	ZNF75CP	Q92670	426 aa	Predicted RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	CNKSR1	Q969H4	720 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	DDX27	Q96GQ7	796 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	WHRN	Q9P202	907 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	RGPD5	Q99666	1765 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	USP1	O94782	785 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	DRG2	P55039	364 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	POU5F1	Q01860	360 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	ROR2	Q01974	943 aa	Known RBP	10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	MGAT5	Q09328	741 aa		10.39	□□□□□ -0.75
ERCC3-208	ENST00000491292	FAM98C	Q17RN3	349 aa	Known RBP	10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms