RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 OSBPL6Q9BZF3 934 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 LRRCC1Q9C099 1032 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ALDH8A1Q9H2A2 487 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF703Q9H7S9 590 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ANKFY1Q9P2R3 1169 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 TESQ9UGI8 421 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 CLCA2Q9UQC9 943 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 SHPRHQ149N8 1683 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ABCC4O15439 1325 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 CHD1O14646 1710 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 KIDINS220Q9ULH0 1771 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ABCC1P33527 1531 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP7AQ04656 1500 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 QRICH2Q9H0J4 1663 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 A0A0A6YYJ9 748 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PRSS38A1L453 326 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 LCHNA4D1U4 455 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 GOLGA8AA7E2F4 631 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 FKBP9O95302 570 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CAVIN2O95810 425 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PEX11BO96011 259 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 TUBB4AP04350 444 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 LPLP06858 475 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 GAAP10253 952 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CHMLP26374 656 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ADSLP30566 484 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 HSPA4P34932 840 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 GZMKP49863 264 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 LGALS4P56470 323 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 RNASE9P60153 205 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CCT2P78371 535 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CDK17Q00537 523 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 DUSP8Q13202 625 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 UBE3CQ15386 1083 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 UGT8Q16880 541 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CT83Q5H943 113 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 FNDC7Q5VTL7 733 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 BROXQ5VW32 411 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 MBNL2Q5VZF2 373 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 SULT6B1Q6IMI4 303 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CAVIN1Q6NZI2 390 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CEP85Q6P2H3 762 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 SASS6Q6UVJ0 657 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 FKBP9P1Q75LS8 142 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 DDX46Q7L014 1031 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF627Q7L945 461 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 APBB1IPQ7Z5R6 666 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF18BQ86Y91 864 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 GLB1L2Q8IW92 636 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 BCL6BQ8N143 479 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PPM1KQ8N3J5 372 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PDCL2Q8N4E4 241 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 EFHBQ8N7U6 833 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 MDGA1Q8NFP4 955 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 MDM1Q8TC05 714 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 SSH3Q8TE77 659 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 NKD2Q969F2 451 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 DCLRE1CQ96SD1 692 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 STK31Q9BXU1 1019 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 TM6SF1Q9BZW5 370 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 REXO4Q9GZR2 422 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 TSPY26PQ9H489 355 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 DIAPH3Q9NSV4 1193 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 SPTLC3Q9NUV7 552 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CEP72Q9P209 647 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 EDARQ9UNE0 448 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 LIMCH1Q9UPQ0 1083 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PAXBP1Q9Y5B6 917 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 DMRT1Q9Y5R6 373 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 CD109Q6YHK3 1445 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ANKRD26Q9UPS8 1709 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 AOX1Q06278 1338 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 NLRP1Q9C000 1473 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 ABCA9Q8IUA7 1624 aa2.39□□□□□ -2.03
SNRNP40-207ENST00000491106 PPRC1Q5VV67 1664 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 HIP1O00291 1037 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 RNASET2O00584 256 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 FOXN1O15353 648 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 B3GALT2O43825 422 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 AKR1B10O60218 316 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 KDM1AO60341 852 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 RFPL3O75679 317 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 LY86O95711 162 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ITGB1P05556 798 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 SPATA31D3P0C874 917 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 GSPT1P15170 499 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 PDCP20941 246 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 MGAT1P26572 445 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 PSMA5P28066 241 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 CNGA1P29973 690 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 APOBEC3AP31941 199 aaPredicted RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 NANOS3P60323 173 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 RAP2BP61225 183 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 UBE2HP62256 183 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 FAM193AP78312 1265 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 SLC25A3Q00325 362 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 NHLH2Q02577 135 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 CPSF1Q10570 1443 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 STRN3Q13033 797 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms