RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ATXN1P54253 815 aaKnown RBP22.69■■□□□ 1.22
CLIP2-208ENST00000491075 PPP2R5DQ14738 602 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 PRSS36Q5K4E3 855 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 NECAB1Q8N987 351 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 CNTNAP3BQ96NU0 1288 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 KIFC3Q9BVG8 833 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 CNTNAP3Q9BZ76 1288 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 CHRDQ9H2X0 955 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 BRD9Q9H8M2 597 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 ZFP14Q9HCL3 533 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 TOPORSQ9NS56 1045 aaPredicted RBP22.69■■□□□ 1.22
CLIP2-208ENST00000491075 GMEB2Q9UKD1 530 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 USP18Q9UMW8 372 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 KMT2BQ9UMN6 2715 aaPredicted RBP22.69■■□□□ 1.22
CLIP2-208ENST00000491075 F5P12259 2224 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 SMIM28A0A1B0GU29 152 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 WDR27A2RRH5 827 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 ZNF197O14709 1029 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 MICAL2O94851 1124 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 ATF2P15336 505 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 MUTP22033 750 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 YARSP54577 528 aaKnown RBP22.68■■□□□ 1.22
CLIP2-208ENST00000491075 NRLP54845 237 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 NT5DC1Q5TFE4 455 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 POTEHQ6S545 545 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 TCEAL8Q8IYN2 117 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 NSUN7Q8NE18 718 aaKnown RBP22.68■■□□□ 1.22
CLIP2-208ENST00000491075 KIFAP3Q92845 792 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 CORO1BQ9BR76 489 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 SLC38A7Q9NVC3 462 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 NDRG2Q9UN36 371 aaKnown RBP22.68■■□□□ 1.22
CLIP2-208ENST00000491075 TNFSF13BQ9Y275 285 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 SPTBN2O15020 2390 aa22.68■■□□□ 1.22
CLIP2-208ENST00000491075 TPRP12270 2363 aaKnown RBP22.68■■□□□ 1.22
CLIP2-208ENST00000491075 PDCD11Q14690 1871 aaKnown RBP22.67■■□□□ 1.22
CLIP2-208ENST00000491075 SYN3O14994 580 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 GRM5P41594 1212 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 ANAPC15P60006 121 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 GRM2Q14416 872 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 FAM78AQ5JUQ0 283 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 MAMSTRQ6ZN01 415 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 PDZD4Q76G19 769 aaPredicted RBP22.67■■□□□ 1.22
CLIP2-208ENST00000491075 ZNF687Q8N1G0 1237 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 IRF7Q92985 503 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 ASB16Q96NS5 453 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 RTKNQ9BST9 563 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 TRMT61BQ9BVS5 477 aaKnown RBP22.67■■□□□ 1.22
CLIP2-208ENST00000491075 CCDC94Q9BW85 323 aaPredicted RBP22.67■■□□□ 1.22
CLIP2-208ENST00000491075 RAB23Q9ULC3 237 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 INSL5Q9Y5Q6 135 aa22.67■■□□□ 1.22
CLIP2-208ENST00000491075 H7C4K7 107 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 TDGF1P13385 188 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 TGM1P22735 817 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 FOSBP53539 338 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 SOX4Q06945 474 aaPredicted RBP22.66■■□□□ 1.22
CLIP2-208ENST00000491075 ORC2Q13416 577 aaPredicted RBP22.66■■□□□ 1.22
CLIP2-208ENST00000491075 ME3Q16798 604 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 XKR4Q5GH76 650 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 TPGS2Q68CL5 300 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 HAUS3Q68CZ6 603 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 TCEAL4Q96EI5 215 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 CYP4F11Q9HBI6 524 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 TRPV5Q9NQA5 729 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 ACACBO00763 2458 aa22.66■■□□□ 1.22
CLIP2-208ENST00000491075 PHLPP2Q6ZVD8 1323 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 K7ERI5 159 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 PODXLO00592 558 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 LARGE1O95461 756 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 OR52Z1P0C646 297 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 ARPP19P56211 112 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 ZNF568Q3ZCX4 644 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 ALKAL1Q6UXT8 129 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 ELMOD1Q8N336 334 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 CEP120Q8N960 986 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 CDT1Q9H211 546 aa22.65■■□□□ 1.22
CLIP2-208ENST00000491075 PSMC3P17980 439 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 CCR3P51677 355 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 CYP4A22Q5TCH4 519 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 LAIR1Q6GTX8 287 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 MAP4K3Q8IVH8 894 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 DEPDC1BQ8WUY9 529 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 SMARCD2Q92925 531 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 ZNF334Q9HCZ1 680 aaPredicted RBP22.64■■□□□ 1.21
CLIP2-208ENST00000491075 PARD6AQ9NPB6 346 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 NUB1Q9Y5A7 615 aa22.64■■□□□ 1.21
CLIP2-208ENST00000491075 JAK2O60674 1132 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 SEC24AO95486 1093 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 CCR2P41597 374 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 MRPL58Q14197 206 aaKnown RBP22.63■■□□□ 1.21
CLIP2-208ENST00000491075 SAFBQ15424 915 aaKnown RBP eCLIP22.63■■□□□ 1.21
CLIP2-208ENST00000491075 IQCEQ6IPM2 695 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 VITQ6UXI7 678 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 CELF5Q8N6W0 485 aaKnown RBP22.63■■□□□ 1.21
CLIP2-208ENST00000491075 LEMD2Q8NC56 503 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 FAM3CQ92520 227 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 ACO2Q99798 780 aaKnown RBP22.63■■□□□ 1.21
CLIP2-208ENST00000491075 BHMT2Q9H2M3 363 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 FBXL5Q9UKA1 691 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 MAFFQ9ULX9 164 aa22.63■■□□□ 1.21
CLIP2-208ENST00000491075 PIAS3Q9Y6X2 628 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms