RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 REV3LO60673 3130 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 C2orf71A6NGG8 1288 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 PER2O15055 1255 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 EXOC3O60645 756 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 CYP3A5P20815 502 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 FAM171A1Q5VUB5 890 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 ISM2Q6H9L7 571 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 TAS1R1Q7RTX1 841 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 C12orf56Q8IXR9 622 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 EFCAB13Q8IY85 973 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 GUF1Q8N442 669 aaKnown RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 C3orf58Q8NDZ4 430 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 MRPL17Q9NRX2 175 aaKnown RBP13.91□□□□□ -0.18
LIMK1-207ENST00000491052 LMBRD1Q9NUN5 540 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 DERAQ9Y315 318 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 C2CD2Q9Y426 696 aa13.91□□□□□ -0.18
LIMK1-207ENST00000491052 I3L4J1 428 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 BIN1O00499 593 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 PDXKO00764 312 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 TRAPPC3O43617 180 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-207ENST00000491052 NR3C1P04150 777 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-207ENST00000491052 MCM4P33991 863 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 BRCC3P46736 316 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 WNT7BP56706 349 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
LIMK1-207ENST00000491052 CAMK4Q16566 473 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 DUSP6Q16828 381 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-207ENST00000491052 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-207ENST00000491052 HLA-CQ95604 372 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 MAN1B1Q9UKM7 699 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
LIMK1-207ENST00000491052 COL6A3P12111 3177 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 LINC01565O15544 149 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 NCK2O43639 380 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 EFEMP2O95967 443 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 LRPAP1P30533 357 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 PRCPP42785 496 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 NDUFV1P49821 464 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 DSG1Q02413 1049 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 STIM1Q13586 685 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 SURF1Q15526 300 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 CD300LGQ6UXG3 332 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 FBXL18Q96ME1 805 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 TTPALQ9BTX7 342 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 EMILIN2Q9BXX0 1053 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 UBE2ZQ9H832 354 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-207ENST00000491052 DPP3Q9NY33 737 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 COG5Q9UP83 839 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 IRAK3Q9Y616 596 aa13.89□□□□□ -0.19
LIMK1-207ENST00000491052 DOCK6Q96HP0 2047 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 FSD2A1L4K1 749 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 PPEF2O14830 753 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 CLASP2O75122 1294 aaKnown RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 CNPP09543 421 aaKnown RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 KCNA5P22460 613 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 CYP24A1Q07973 514 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 KIAA0319Q5VV43 1072 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-207ENST00000491052 CCDC127Q96BQ5 260 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 ANKRD36BP1Q96IX9 119 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 FNBP1Q96RU3 617 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 MTMR12Q9C0I1 747 aa13.88□□□□□ -0.19
LIMK1-207ENST00000491052 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms