RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 PARVGQ9HBI0 331 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 TUBGCP4Q9UGJ1 667 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 TBX20Q9UMR3 447 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 CLIC4Q9Y696 253 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 MYH11P35749 1972 aa11.9□□□□□ -0.5
UBA1-209ENST00000490869 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 H7C4K7 107 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
UBA1-209ENST00000490869 SYN3O14994 580 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 TRAK2O60296 914 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
UBA1-209ENST00000490869 CFHP08603 1231 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 POU2F2P09086 479 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 CLTAP09496 248 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 SCP2P22307 547 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 MCM4P33991 863 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 TNFSF9P41273 254 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 CLCN5P51795 746 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 ZNF131P52739 623 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 ROR1Q01973 937 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 SPAG1Q07617 926 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 RESTQ13127 1097 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 PTPAQ15257 358 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 CWF19L1Q69YN2 538 aaKnown RBP11.89□□□□□ -0.51
UBA1-209ENST00000490869 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 SIX5Q8N196 739 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 PHOX2BQ99453 314 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 PLEKHA5Q9HAU0 1116 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 CDH7Q9ULB5 785 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 ZFP37Q9Y6Q3 630 aaPredicted RBP11.89□□□□□ -0.51
UBA1-209ENST00000490869 NUMBLQ9Y6R0 609 aa11.89□□□□□ -0.51
UBA1-209ENST00000490869 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 WDR27A2RRH5 827 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 ANHXE9PGG2 379 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 PIGRP01833 764 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 SRFP11831 508 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 NPR3P17342 541 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 SYT1P21579 422 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 MARCKSP29966 332 aaPredicted RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 DDIT3P35638 169 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 ARPP19P56211 112 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 HTR4Q13639 388 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 KYAT1Q16773 422 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 ST13P5Q8NFI4 369 aaPredicted RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 ITFG1Q8TB96 612 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 ATOH1Q92858 354 aaPredicted RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 FGF13Q92913 245 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 EPSTI1Q96J88 318 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 IRF2BPLQ9H1B7 796 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 HCFC1R1Q9NWW0 138 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 WNT16Q9UBV4 365 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 CCDC39Q9UFE4 941 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 FBXO2Q9UK22 296 aaPredicted RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 PDCD11Q14690 1871 aaKnown RBP11.88□□□□□ -0.51
UBA1-209ENST00000490869 MYO10Q9HD67 2058 aa11.88□□□□□ -0.51
UBA1-209ENST00000490869 CITO14578 2027 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 LACTBL1A8MY62 500 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 H0Y858 1186 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 OGTO15294 1046 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 FAM189A1O60320 539 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 TBC1D4O60343 1298 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 ABLIM3O94929 683 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 AOC1P19801 751 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 CYP3A5P20815 502 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 LRPAP1P30533 357 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 ELF1P32519 619 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 ABCD1P33897 745 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 MRPL58Q14197 206 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 CTXN3Q4LDR2 81 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 PABPC1LQ4VXU2 614 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 ZBTB41Q5SVQ8 909 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 ZNF280DQ6N043 979 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 PARM1Q6UWI2 310 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 TMEM130Q8N3G9 435 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 APPL2Q8NEU8 664 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 DDX12PQ92771 950 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 RPF1Q9H9Y2 349 aaKnown RBP11.87□□□□□ -0.51
UBA1-209ENST00000490869 CYP4F11Q9HBI6 524 aa11.87□□□□□ -0.51
UBA1-209ENST00000490869 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms