RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
SUPT20H-220ENST00000490716 GABRDO14764 452 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 NFICP08651 508 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 NRIP1P48552 1158 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 ALDH7A1P49419 539 aaKnown RBP10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 KRT85P78386 507 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 NUCB2P80303 420 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 RAB33AQ14088 237 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 KMT5BQ4FZB7 885 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 JADE1Q6IE81 842 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 MAFFQ9ULX9 164 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 TICRRQ7Z2Z1 1910 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 KIAA0391O15091 583 aaKnown RBP10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 PAX3P23760 479 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 CCDC85BQ15834 202 aaPredicted RBP10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 C9orf57Q5W0N0 161 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 CYP26C1Q6V0L0 522 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 GDAP2Q9NXN4 497 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 HSFX1Q9UBD0 423 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 MYO7AQ13402 2215 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 SYN3O14994 580 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 CLDN3O15551 220 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 EXTL3O43909 919 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 EPHA5P54756 1037 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 KIAA1841Q6NSI8 718 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 ADHFE1Q8IWW8 467 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 AUTS2Q8WXX7 1259 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 DHX58Q96C10 678 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 XYLT2Q9H1B5 865 aa10.01□□□□□ -0.81
SUPT20H-220ENST00000490716 EPCAMP16422 314 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 SLFN12LQ6IEE8 588 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 RBM43Q6ZSC3 357 aaKnown RBP10□□□□□ -0.81
SUPT20H-220ENST00000490716 C1orf127Q8N9H9 656 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 STAMQ92783 540 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 SPATA32Q96LK8 384 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 ACCSQ96QU6 501 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 BARX2Q9UMQ3 279 aaPredicted RBP10□□□□□ -0.81
SUPT20H-220ENST00000490716 SHISA7A6NL88 538 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 TGM5O43548 720 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 ZNF202O95125 648 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 PRSS36Q5K4E3 855 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 GPR149Q86SP6 731 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 THNSL1Q8IYQ7 743 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 B3GALT6Q96L58 329 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 SCLT1Q96NL6 688 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 PCDHB8Q9UN66 801 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 PODXLO00592 558 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 PER2O15055 1255 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 FAM13AO94988 1023 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 HOXB8P17481 243 aaPredicted RBP10□□□□□ -0.81
SUPT20H-220ENST00000490716 IGFBP4P22692 258 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 TKTP29401 623 aaKnown RBP10□□□□□ -0.81
SUPT20H-220ENST00000490716 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 SPATA18Q8TC71 538 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 CDK5RAP3Q96JB5 506 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 TMEM206Q9H813 350 aa10□□□□□ -0.81
SUPT20H-220ENST00000490716 SF3B1O75533 1304 aaKnown RBP eCLIP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 GADD45BO75293 160 aaPredicted RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 MOSPD3O75425 235 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 GLUD2P49448 558 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 LILRA4P59901 499 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 NCBP1Q09161 790 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 PSMD6Q15008 389 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 PLPP4Q5VZY2 271 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ADAMTS19Q8TE59 1207 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ADPGKQ9BRR6 497 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 CRISPLD1Q9H336 500 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 CD207Q9UJ71 328 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 AGO2Q9UKV8 859 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 GDAQ9Y2T3 454 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 CASTOR2A6NHX0 329 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 PRPF6O94906 941 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 CENPPQ6IPU0 288 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 DPY19L2P1Q6NXN4 242 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 BLZF1Q9H2G9 400 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 USP15Q9Y4E8 981 aaPredicted RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ANHXE9PGG2 379 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 NR1I2O75469 434 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 MICAL2O94851 1124 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 TYMPP19971 482 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 KRT17Q04695 432 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 STRN3Q13033 797 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 KNOP1Q1ED39 458 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 HERC4Q5GLZ8 1057 aaPredicted RBP9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 GLRA4Q5JXX5 417 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ZBTB33Q86T24 672 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ABI1Q8IZP0 508 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 RABGGTAQ92696 567 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 ASIC4Q96FT7 647 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 COLEC11Q9BWP8 271 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 PANK2Q9BZ23 570 aa9.99□□□□□ -0.81
SUPT20H-220ENST00000490716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms