RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CCL16O15467 120 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 PIGRP01833 764 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 CLTAP09496 248 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 SCP2P22307 547 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 NMT1P30419 496 aaKnown RBP11.29□□□□□ -0.6
RBM39-236ENST00000490484 MCM4P33991 863 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 OR1D2P34982 312 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 RAB33AQ14088 237 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
RBM39-236ENST00000490484 ANKS3Q6ZW76 656 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 DYMQ7RTS9 669 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 MAP4K3Q8IVH8 894 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 KCNN1Q92952 543 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 MYADMQ96S97 322 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
RBM39-236ENST00000490484 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 TISP43B9A030 160 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 SYN3O14994 580 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 FAM189A1O60320 539 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 PAPLNO95428 1278 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.61e-12■■■□□ 14.6
RBM39-236ENST00000490484 FSHRP23945 695 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 RPL9P32969 192 aaKnown RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 DDIT3P35638 169 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 STAT6P42226 847 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 ARPP19P56211 112 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 NTHL1P78549 312 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 ROR1Q01973 937 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 TDGQ13569 410 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 ENOX2Q16206 610 aaKnown RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 IER5LQ5T953 404 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 GRASPQ7Z6J2 395 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 ST13P5Q8NFI4 369 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
RBM39-236ENST00000490484 PLEKHA5Q9HAU0 1116 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 DUSP12Q9UNI6 340 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
RBM39-236ENST00000490484 A0A087X0B3 334 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 A0A0B4J269 797 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 TTC26A0AVF1 554 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 MYMKA6NI61 221 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 OGTO15294 1046 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 NARSO43776 548 aaKnown RBP11.27□□□□□ -0.61
RBM39-236ENST00000490484 XYLBO75191 536 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
RBM39-236ENST00000490484 HOXA9P31269 272 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 ABCD1P33897 745 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 GTF2BQ00403 316 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 STK38Q15208 465 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 KYAT1Q16773 422 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 CTXN3Q4LDR2 81 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 CCDC73Q6ZRK6 1079 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 PRSS33Q8NF86 280 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 DDX12PQ92771 950 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 SNX21Q969T3 373 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 MFSD1Q9H3U5 465 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 MRPL44Q9H9J2 332 aaKnown RBP11.27□□□□□ -0.61
RBM39-236ENST00000490484 RPF1Q9H9Y2 349 aaKnown RBP11.27□□□□□ -0.61
RBM39-236ENST00000490484 TBC1D7Q9P0N9 293 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
RBM39-236ENST00000490484 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
RBM39-236ENST00000490484 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 NFICP08651 508 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 LAMP2P13473 410 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 LRPAP1P30533 357 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 NASPP49321 788 aaPredicted RBP11.26□□□□□ -0.61
RBM39-236ENST00000490484 ACOT2P49753 483 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 NHLH1Q02575 133 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
RBM39-236ENST00000490484 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 JADE1Q6IE81 842 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 ZNF280DQ6N043 979 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
RBM39-236ENST00000490484 SV2BQ7L1I2 683 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 PDILTQ8N807 584 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
RBM39-236ENST00000490484 ST6GALNAC4Q9H4F1 302 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms