RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
DUBR-204ENST00000490441 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
DUBR-204ENST00000490441 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
DUBR-204ENST00000490441 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
DUBR-204ENST00000490441 CITO14578 2027 aa12.31□□□□□ -0.44
DUBR-204ENST00000490441 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 H0YCG3 227 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 SYN3O14994 580 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 PI15O43692 258 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 TOM1L1O75674 476 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 POU2F2P09086 479 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 KCNE1P15382 129 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 ELF1P32519 619 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 RPL9P32969 192 aaKnown RBP12.3□□□□□ -0.44
DUBR-204ENST00000490441 BRCC3P46736 316 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 MCM2P49736 904 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 NTHL1P78549 312 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
DUBR-204ENST00000490441 PABPC1LQ4VXU2 614 aaKnown RBP12.3□□□□□ -0.44
DUBR-204ENST00000490441 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 HYIQ5T013 277 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
DUBR-204ENST00000490441 ALKAL1Q6UXT8 129 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 TAS1R3Q7RTX0 852 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
DUBR-204ENST00000490441 DTWD2Q8NBA8 298 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 FGF13Q92913 245 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 BICD1Q96G01 975 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 PLIN2Q99541 437 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 ARHGEF3Q9NR81 526 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 CNTN3Q9P232 1028 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 MYH11P35749 1972 aa12.3□□□□□ -0.44
DUBR-204ENST00000490441 KRBA1A5PL33 1030 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 H7C4K7 107 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 PRRG1O14668 218 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 CLDN3O15551 220 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 LRG1P02750 347 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 PROZP22891 400 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 NBL1P41271 181 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 ARPP19P56211 112 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 SOX4Q06945 474 aaPredicted RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 ANGPT1Q15389 498 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 TMEM161BQ8NDZ6 487 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 ST13P5Q8NFI4 369 aaPredicted RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 CALML4Q96GE6 196 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 SHDQ96IW2 340 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 AK8Q96MA6 479 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 ZMAT2Q96NC0 199 aaKnown RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 PNMA5Q96PV4 448 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 NTPCRQ9BSD7 190 aaKnown RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 SLC2A4RGQ9NR83 387 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 KCNH3Q9ULD8 1083 aa12.29□□□□□ -0.44
DUBR-204ENST00000490441 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
DUBR-204ENST00000490441 ABLIM1O14639 778 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 SLC26A4O43511 780 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 BMP15O95972 392 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 MAPTP10636 758 aaKnown RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 IGFBP6P24592 240 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 MCM4P33991 863 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 UBA7P41226 1012 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 ROR1Q01973 937 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 TMEM119Q4V9L6 283 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 SLC8B1Q6J4K2 584 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 PARM1Q6UWI2 310 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 RSPO2Q6UXX9 243 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 APPL2Q8NEU8 664 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 ZNF461Q8TAF7 563 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 ITFG1Q8TB96 612 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 FGF14Q92915 247 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 NKD2Q969F2 451 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 C18orf25Q96B23 403 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
DUBR-204ENST00000490441 DNMT3BQ9UBC3 853 aaKnown RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.28□□□□□ -0.44
DUBR-204ENST00000490441 EP300Q09472 2414 aaPredicted RBP12.27□□□□□ -0.44
DUBR-204ENST00000490441 PRR23AA6NEV1 266 aa12.27□□□□□ -0.45
DUBR-204ENST00000490441 FAM13AO94988 1023 aa12.27□□□□□ -0.45
DUBR-204ENST00000490441 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
DUBR-204ENST00000490441 RHOP08100 348 aa12.27□□□□□ -0.45
DUBR-204ENST00000490441 CLTAP09496 248 aa12.27□□□□□ -0.45
DUBR-204ENST00000490441 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
DUBR-204ENST00000490441 LIG4P49917 911 aa12.27□□□□□ -0.45
DUBR-204ENST00000490441 GPC5P78333 572 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms