RNA–Protein interactions for RNA: ENST00000489848.5

NEPRO-218, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,576 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-218ENST00000489848 MRPL44Q9H9J2 332 aaKnown RBP17.4■□□□□ 0.38
NEPRO-218ENST00000489848 TUBGCP4Q9UGJ1 667 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 MUTYHQ9UIF7 546 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
NEPRO-218ENST00000489848 IDEP14735 1019 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 TKTP29401 623 aaKnown RBP17.4■□□□□ 0.38
NEPRO-218ENST00000489848 BRCC3P46736 316 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 ATAT1Q5SQI0 421 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 PALB2Q86YC2 1186 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 GLYCTKQ8IVS8 523 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 TRIM9Q9C026 710 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 MTRRQ9UBK8 725 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 DPP7Q9UHL4 492 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 MUC6Q6W4X9 2439 aa17.4■□□□□ 0.38
NEPRO-218ENST00000489848 ZNF318Q5VUA4 2279 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 I3L4J1 428 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 GPR37L1O60883 481 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 ADSSP30520 456 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 LRPAP1P30533 357 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 ME1P48163 572 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
NEPRO-218ENST00000489848 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 SLFN12LQ6IEE8 588 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 IQUBQ8NA54 791 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 STAMQ92783 540 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 DHX58Q96C10 678 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 PANK4Q9NVE7 773 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 TBC1D7Q9P0N9 293 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 FBXW11Q9UKB1 542 aa17.39■□□□□ 0.37
NEPRO-218ENST00000489848 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.37
NEPRO-218ENST00000489848 SCN1AP35498 2009 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 ADAM12O43184 909 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 RFPL2O75678 378 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 GCNT3O95395 438 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 SPATA31D3P0C874 917 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 MYBP10242 640 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 CYP3A5P20815 502 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 SPAG1Q07617 926 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 ALCAMQ13740 583 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 ELMSAN1Q6PJG2 1045 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 SPATA31D4Q6ZUB0 917 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 TMEM130Q8N3G9 435 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 ZNF707Q96C28 371 aaPredicted RBP17.38■□□□□ 0.37
NEPRO-218ENST00000489848 TSPAN18Q96SJ8 248 aa17.38■□□□□ 0.37
NEPRO-218ENST00000489848 RPF1Q9H9Y2 349 aaKnown RBP17.38■□□□□ 0.37
NEPRO-218ENST00000489848 UBQLN1Q9UMX0 589 aaKnown RBP17.38■□□□□ 0.37
NEPRO-218ENST00000489848 TSC2P49815 1807 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 C2CD4DB7Z1M9 353 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 SYN3O14994 580 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 SP100P23497 879 aaPredicted RBP17.37■□□□□ 0.37
NEPRO-218ENST00000489848 ADALQ6DHV7 355 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 RSPO2Q6UXX9 243 aaPredicted RBP17.37■□□□□ 0.37
NEPRO-218ENST00000489848 CYP26C1Q6V0L0 522 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 CD302Q8IX05 232 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 CCDC65Q8IXS2 484 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 KREMEN2Q8NCW0 462 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 SUSD3Q96L08 255 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 LRRC27Q9C0I9 530 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 MAGEF1Q9HAY2 307 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 ZDHHC7Q9NXF8 308 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 AGO2Q9UKV8 859 aaKnown RBP17.37■□□□□ 0.37
NEPRO-218ENST00000489848 USTQ9Y2C2 406 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 NR2E1Q9Y466 385 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 BACE2Q9Y5Z0 518 aa17.37■□□□□ 0.37
NEPRO-218ENST00000489848 CCDC195A0A1B0GUA6 201 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 POLR2DO15514 142 aaKnown RBP17.36■□□□□ 0.37
NEPRO-218ENST00000489848 AARSP49588 968 aaKnown RBP eCLIP17.36■□□□□ 0.379e-8■■■■■ 61.8
NEPRO-218ENST00000489848 ACOT2P49753 483 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
NEPRO-218ENST00000489848 RAB33AQ14088 237 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 TMEM31Q5JXX7 168 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 CRELD2Q6UXH1 353 aaPredicted RBP17.36■□□□□ 0.37
NEPRO-218ENST00000489848 CHAMP1Q96JM3 812 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 ACCSQ96QU6 501 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 EXOC7Q9UPT5 735 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 NUB1Q9Y5A7 615 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 FAM86C2PA6NEL3 165 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 TBC1D4O60343 1298 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 ZMYND10O75800 440 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 AMPD3Q01432 767 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 VARS2Q5ST30 1063 aaKnown RBP17.36■□□□□ 0.37
NEPRO-218ENST00000489848 JADE1Q6IE81 842 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 SLC8B1Q6J4K2 584 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 CCDC149Q6ZUS6 474 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 GLIS3Q8NEA6 775 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
NEPRO-218ENST00000489848 POMGNT1Q8WZA1 660 aa17.36■□□□□ 0.37
NEPRO-218ENST00000489848 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms